Gene Phep_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0015 
Symbol 
ID8251099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp18619 
End bp19965 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content39% 
IMG OID644933664 
Productprotein of unknown function DUF195 
Protein accessionYP_003090303 
Protein GI255529931 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.567486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTG ATAACAATAT TAGTATGGAA ATAACAGGAA TAGTTTTATT GATCATCATT 
CTGGCCAGTC TTCTCTTTTT ATTGTTTAAA AAGCCCGCTG CCCATAATAC TCAGTTGCTA
CTTTTAGAAC TAAAAGAAAC AGAACACCAA AAATCCTTAA ATTGGTTAAG GGACGAAAAA
CAAAAGCTGG AAGATGAACT GAACGATCTT CGTCAGAATT TTATTGCAGA ACGCAGCAAA
GTGATCAAGG CAGAAGAAAA TTTAATGGCC CAGAGGGAAA GGTATGCTGA ACAAGAAAAA
TCTATAGCCG AACTTCAGCA ACGCTTTAAA CTGGAATTTG AAAATATTGC CGGTAAAATA
CTGGACGAAA AATCGGAAAA ATTTACCCTG CAAAACAAGG CAAACCTCGA TATCATTTTA
AATCCCCTTA AAGAAAACAT CAAAGCTTTT GAAGACAAAG TTGAAAAAGT GTATAAAGCC
GAATCTGATG AACGCAACAT TTTAAAAGGG GTAATTGCAC AGCTGATGGA CCAGAGTAAA
CAGATCCAGG AAGAGGCCGG CAATTTAACC AGGGCCCTTA AAGGCGACAG TAAAAAACAG
GGCAACTGGG GAGAAGTGAT ACTGGAACGT GTCCTGGAGC GCTCCGGTTT AACCAAGGAT
AGGGAATATA GGATACAAAG CAGTTTAAGC TCGTCTGAAG GCTCCAGGAT GCAGCCGGAT
GTAATTATTG ACCTTCCGGA TGATAAACAC ATTATCGTTG ATGCCAAGGT CTCTTTAGTA
GCTTACGAGC GATTGGTAAC AGCAGATAAA GATGAAGAAA AGGAAATACA GCTCAAACAG
CATTTAATTT CTATAAAAAC ACATATCCAG GGTTTGTCAG GAAAGAACTA CCAGGAGCTT
TATCAGATCA ATTCACCTGA TTTTGTATTG CTTTTTATTC CTATTGAATC TTCTTTTGGT
ATTGCTGTAC AACAGGATGC CGAACTTTTT AATTATGCCT GGGACCGTAA AGTTGTATTG
GTAAGCCCTT CTACCTTACT GGCTACCTTA CGTACCATTG CCAGCATCTG GAAACAGGAA
AGACAAAACA GGAACGTGTT GGAAATAGCC CGTTTAAGTG GAAGTATGTA CGATAAATTT
GTAGGTTTTT TAACCGATAT GGAAAGTATA GGCCGGAACA TTAAACTGAG CCAGGATGCT
TATGATAAGG CCATTAACAA GTTATCGACA GGTACCGGGA ACCTGTCCAA TACCTCAGAA
AAGATAAAAA AATTAGGTGC CAAAGCAACA AAGCAGATTG ACACCAAATT TTTAGATTCT
GTTTTACCTG AAGAAGAGGG TTTATAG
 
Protein sequence
MTFDNNISME ITGIVLLIII LASLLFLLFK KPAAHNTQLL LLELKETEHQ KSLNWLRDEK 
QKLEDELNDL RQNFIAERSK VIKAEENLMA QRERYAEQEK SIAELQQRFK LEFENIAGKI
LDEKSEKFTL QNKANLDIIL NPLKENIKAF EDKVEKVYKA ESDERNILKG VIAQLMDQSK
QIQEEAGNLT RALKGDSKKQ GNWGEVILER VLERSGLTKD REYRIQSSLS SSEGSRMQPD
VIIDLPDDKH IIVDAKVSLV AYERLVTADK DEEKEIQLKQ HLISIKTHIQ GLSGKNYQEL
YQINSPDFVL LFIPIESSFG IAVQQDAELF NYAWDRKVVL VSPSTLLATL RTIASIWKQE
RQNRNVLEIA RLSGSMYDKF VGFLTDMESI GRNIKLSQDA YDKAINKLST GTGNLSNTSE
KIKKLGAKAT KQIDTKFLDS VLPEEEGL