Gene Phep_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0010 
Symbol 
ID8251094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp12259 
End bp13887 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content39% 
IMG OID644933659 
Producthypothetical protein 
Protein accessionYP_003090298 
Protein GI255529926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA AACGAATTGT AATAAACTCG CTGAATTTTT CCCTGCTTAT TTTCATAAGT 
ATGCTCTTTT ATGCCTGTGC AAGTATGCAG CAACCACAAG GAGGACCGAG AGATACGGAG
CCCCCAAAGA TTTTAAAAAT GAGCCCTAAA AATTTGACCG TCAATTTTAC TGCCCCTAAA
ATTGTCATTG AGTTTGATGA ATATTTTAAA ATTCAAAATG AGTTTAAGGA ATTTTCCGTT
TCACCTGAAA TGGAAAAAGC TCCACAGCTA AAAGTCAAAG GTAAAAAACT GGAAGTAAGT
ATTCAGGACA GCCTGGAAAA GAACACCACC TACACCTTAA ATTTCGGCAA GGCCATAGGC
GATGTAAATG AAGGCAATAC CGTTAAAAAC TTTACCTATG TTTTTTCTAC CGGCCCCCAG
CTTGATTCTT TAAGTATTAA AGGAAAAGTT ACCAATTCGG TAACCGGACT GCCTGAACTG
GATGCGCTTG TATTTATACT TCCTTTAAAA AGAGATACCC TATTTGGTAA AGGTAAACCA
TCCATATTTA CACTGACAGA CAGTAGTGGC AATTATGCAT TAAACAACCT GAGAAAAGAT
ACTTATAAGA TCTATGCCCT AAAAGAAAAA GGGGGAGATA AGATCTATCA GCAGGCTTCC
GACGAGATCG GCTTTTTAAA GGACTCAATT TTTTTAGATA AGGTTCTGGA TAACATCAAT
TTAAGTATTT TTAAAGAAGA TGCGGAGACT TTCAGGATAT TGGACAGAAA GTTAAATGCA
GACGGAAGCA TTTCTTTTGC TTTTAACCAG AAACTAAAAA AACCGGAAGT GGTGGTTACA
GACCCCCCTG CACTAAATGA GGGTAAACTG ATCAAATTTA GCCGGAACAA TGACTCATTA
AAAGTCTGGC TAAAGGACCT GAGCTTTGAT TCTACCAAAA TAACCATTAA AGACCAGGGG
AAGGAACTGC AGACGGTAAA CATTACCCGG GGTAAAAAAG AAACCTATAC CCGCAACCTA
ACGGCCACCG ACAATCTTGA GGGACGCCTT TTAAACCCAA ACAAGCCATT AAAACTGAGT
TTTAATTTTC CCCTGGAAAG CACAGATATC ACCAAAATAA GTTTACTGGA AGATTCCGTT
GAACGTACAG GATTTACATT GTTAAAAGAC AGTGCAGACT TTCTCTCCTA CTATTTCAGG
TATCCCTGGA AACCCAAAAA GACTTACGAA CTAAAATTTG AAGCAGGGGC TGCAACTGCT
ATATTCAACA CCAAGAACAA AGAATTTATC AAAACGTTTG AGCTGGCAAA TAAAGACGAT
TATGGAACAT TAATTGTAAA AATAGTTCCG CCCGAGACCG ATAAAAGTTA CATTCTTGAA
GTTATAAATG AAAGCAAAAA TGTAGCCAAT ACCCTGGTGG TGACCAGAGA TACGACAGTC
AGGTTTGCCA ATTACAAAGC AGGCAAATAC TGGTTGCGCA TTACTTACGA CACCAATAAA
AACGGAGTAT GGGATACCGG AAATGTAAAA CTTGGCCGGC AGCCCGAAAG GATCTGGAAT
GAACCCAAAG AGCTCTCTAT AAGGGCCCTC TGGGAAAGGA ACGAAACTGT AACTATTCCT
AAGGAATAA
 
Protein sequence
MAKKRIVINS LNFSLLIFIS MLFYACASMQ QPQGGPRDTE PPKILKMSPK NLTVNFTAPK 
IVIEFDEYFK IQNEFKEFSV SPEMEKAPQL KVKGKKLEVS IQDSLEKNTT YTLNFGKAIG
DVNEGNTVKN FTYVFSTGPQ LDSLSIKGKV TNSVTGLPEL DALVFILPLK RDTLFGKGKP
SIFTLTDSSG NYALNNLRKD TYKIYALKEK GGDKIYQQAS DEIGFLKDSI FLDKVLDNIN
LSIFKEDAET FRILDRKLNA DGSISFAFNQ KLKKPEVVVT DPPALNEGKL IKFSRNNDSL
KVWLKDLSFD STKITIKDQG KELQTVNITR GKKETYTRNL TATDNLEGRL LNPNKPLKLS
FNFPLESTDI TKISLLEDSV ERTGFTLLKD SADFLSYYFR YPWKPKKTYE LKFEAGAATA
IFNTKNKEFI KTFELANKDD YGTLIVKIVP PETDKSYILE VINESKNVAN TLVVTRDTTV
RFANYKAGKY WLRITYDTNK NGVWDTGNVK LGRQPERIWN EPKELSIRAL WERNETVTIP
KE