Gene Phep_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0003 
Symbol 
ID8251087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2155 
End bp3102 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content44% 
IMG OID644933652 
Producthypothetical protein 
Protein accessionYP_003090291 
Protein GI255529919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA CCAGTATCCT GAATGTGCTG GCGGTTGTGG CGCTACTGCT TGGCAGCTGC 
AACAGCGCAG GGGACAAGCC TGCAAACAGC AAAAAAATTA CCGGGAAGCA GCCTTTTGAT
GCCGTTATTG GCATTAAATA TTATGAAGTA AAGCGTCGTT TTAGTACCGG CCTCTCTTTT
AATGAACTTG GCTTTCAGCA GGAACCTTCC TGGATCATAC AGTTCAAATC CAGGGACACG
ATAATGGCTT ATAGCCCTCA GTATAAAAGG ATGCAGTCCT TTTACCTGCA TTACGACCAT
GGTGATGTGT ATAATTTTGC CAAAGAGTGG TTCAGGATCA AGAAGGTAAG TAAAGACAGC
CTGGTCTTTC AGCGCCTTCA TTTAACGGCA AGGGAGATTT CTAAAGACAT CCGTTCTGAC
GTAAACCTGA CCTGGTATGC TGAAGATTAT ATCAACAAGA CACTTAAAAC GTCGGTAGAA
AAGCTGCAAC GCCCTACCAG GGCAGATACG CTGTACATCC AAAAGCTGGC AGAAAAAACG
AACAGGAATC CCGACAACCG TGACAGTGCC TTTGGGGCCC GGCAACCCGT GGAATTGATC
CCCCTAAGTA AAATGATTAA AGTAGAAAAG ATCAGCAGTG TGGATAAGCT TTTGGGCAAG
ACTGAGGCTT ATGATTATCT TTTCCCGAGA TACCGGGTCG ACATTTCAAA AGCTTACGCC
GATTTTGGCT ACGATTTTTC GGCTGTAGTT GATGCAAAAG GCCGCATACA TTTAGGCGCT
TTTCATACCA ATTTTCCGGA GAATTATGAG CCGCGTAAAA AAACGCTGGA GGCCATTATT
GATGTTTATT TTCAGCATCT TTTAAAGGTT GTTCCGGGAA AAACACTCGG AATTCCGCAT
TCAAGTGAAA TAAACTTCTC GGTAATAGGC CGGAAAAACA GCAAATAA
 
Protein sequence
MTKTSILNVL AVVALLLGSC NSAGDKPANS KKITGKQPFD AVIGIKYYEV KRRFSTGLSF 
NELGFQQEPS WIIQFKSRDT IMAYSPQYKR MQSFYLHYDH GDVYNFAKEW FRIKKVSKDS
LVFQRLHLTA REISKDIRSD VNLTWYAEDY INKTLKTSVE KLQRPTRADT LYIQKLAEKT
NRNPDNRDSA FGARQPVELI PLSKMIKVEK ISSVDKLLGK TEAYDYLFPR YRVDISKAYA
DFGYDFSAVV DAKGRIHLGA FHTNFPENYE PRKKTLEAII DVYFQHLLKV VPGKTLGIPH
SSEINFSVIG RKNSK