Gene Dfer_5786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5786 
Symbol 
ID8229402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6946050 
End bp6947159 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content51% 
IMG OID644933631 
Producthypothetical protein 
Protein accessionYP_003090139 
Protein GI255039518 
COG category[R] General function prediction only 
COG ID[COG4867] Uncharacterized protein with a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.115638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGAC ATCGTTTCAC GAAATACATT CCGCCCGAGC AAGGGGCGAA CAGCAAGTTC 
GACCAGCTTT TTGATATTTT CCAACAGCTG CTCCTGATGA CGTCCGGCGA TGTTACGGAG
GCCATGTCGT GGCTTAGCCA GCTCGACCGC CAGTATAACC TGACGAACGA TTCGTACGGG
ATCGGCGATT TTTTCGAGGA CCTCAAAAAG AAAGGCTACG TTACCGAGGA GAAACAGGAC
GGCGAAGGCA GGCTGATTAT GACGCCCAAA GCCGAGAAAA GCATTCGCAA GAGTGCCCTG
GACGAGATTT TCGGTAAGCT GAAAAGGTCC AAATCAGGCG GCAATCACCA CACACCACAC
CTGGGCACCG GCGACGAGCT TACCAGCGAC ATCCGCGATT TCCAGTTTGG CGATACGCTC
GACCAGATTT CAATGACCGA GTCGATTAAG AATGCGCAGG TAAATCACGG GATCGGTGAT
TTTATGCTCA TGGAAAACGA CCTGGAAGTG GTGGAACGCG AGCAGAAAAC CACTACGGCG
ACCGTCGTGA TGATCGACAT CAGCCATTCG ATGATCCTGT ACGGCGAGGA CCGCATTACG
CCTGCTAAAA AGGTAGCGCT CGCACTGGCA GAGTTGATTC GCACGAAATA CCCGAAAGAC
TCGCTGGATA TCATCGTGTT CGGCAATGAT GCCTGGCAAA TCCAGTTGAA AGACCTCCCT
TACCTCGAAG TAGGACCTTA CCACACCAAC ACCGTGGCCG GCCTCGAACT GGCGATGGAC
ATTCTACGCC GCAAAAAAAC GCGGAACAAG CAGATTTTCA TGATCACCGA CGGTAAGCCG
ACGTGCCTGA AAGAAGGTAT CCGATATTAC AAAAACAGCT TCGGCCTCGA CCGCAAGATC
ATCAACAAAA CGCTCACATT AGCTGCTCAA TGCCGCAGGC TGGATATTCC CGTCACGACA
TTCATGATCG CGACCGACCC ATACCTGAAA CAGTTTGTGC AAAACTTCAC GCAAGTAAAT
AACGGCCGGG CTTATTACAG CAATTTGCAA GGCTTAGGGG GCTTTGTACT CGAAGATTTT
CAGCGGAACA GGCGAAAAAA CGTCAAGTGA
 
Protein sequence
MRGHRFTKYI PPEQGANSKF DQLFDIFQQL LLMTSGDVTE AMSWLSQLDR QYNLTNDSYG 
IGDFFEDLKK KGYVTEEKQD GEGRLIMTPK AEKSIRKSAL DEIFGKLKRS KSGGNHHTPH
LGTGDELTSD IRDFQFGDTL DQISMTESIK NAQVNHGIGD FMLMENDLEV VEREQKTTTA
TVVMIDISHS MILYGEDRIT PAKKVALALA ELIRTKYPKD SLDIIVFGND AWQIQLKDLP
YLEVGPYHTN TVAGLELAMD ILRRKKTRNK QIFMITDGKP TCLKEGIRYY KNSFGLDRKI
INKTLTLAAQ CRRLDIPVTT FMIATDPYLK QFVQNFTQVN NGRAYYSNLQ GLGGFVLEDF
QRNRRKNVK