Gene Dfer_5778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5778 
Symbol 
ID8229394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6940268 
End bp6941026 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID644933623 
ProductFeS assembly ATPase SufC 
Protein accessionYP_003090131 
Protein GI255039510 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCTA TTAATGACTT GCGTGCCTCC ATTGAAGGTA AGGAAATATT AAAAGGCATC 
AATCTGGAAG TCAAGCCGGG TGAAGTGCAT GCGATTATGG GGCCCAATGG TTCCGGTAAA
AGTACTTTGG CATCGGTATT GGCAGGAAGA GAAGAGTACG AGGTTACTGG CGGAAATGTA
GTTTTTGAAG GAAAAGAGCT TCTTGAACTG GCTCCTGAGG AAAGAGCTGC GGAAGGGATT
TTCCTGGCAT TCCAATATCC GGTCGAGATC CCGGGCGTGA CAACCATCAA CTTCCTGAAA
ACGGCGGTAA ACGAAATCCG TAAATATAAA GGTGAAGCTC CGCTGGACGC TGCGCAGTTC
CTGAAAATGG TGCGTGAAAA GGCGAAACTG GTGAGTATGA ACGATTCGCT GCTGAAACGT
GCATTGAACG AAGGCTTCTC GGGCGGTGAG AAAAAACGCA ACGAGGTGTT TCAGATGGCA
GTGCTCGAAC CGAAGCTGGC AATCCTGGAT GAAACGGATT CCGGCTTGGA TATCGATGCA
TTGCGCATTG TAGCTGAGGG TGTTAACTCG CTCCGCTCAC CGGAACGTTC GACGATCGTC
GTGACCCACT ACCAGCGCTT GCTGGATTAC ATCGTGCCGG ATTATGTGCA CGTTTTGTAC
AAAGGCCGCA TCGTAAAATC GGGTCCGAAG GAACTTGCCC TCGAATTGGA AGAAAAAGGT
TACGACTGGA TCAAGGCGGA AGTAGAAGCG GTAGGTTAA
 
Protein sequence
MLSINDLRAS IEGKEILKGI NLEVKPGEVH AIMGPNGSGK STLASVLAGR EEYEVTGGNV 
VFEGKELLEL APEERAAEGI FLAFQYPVEI PGVTTINFLK TAVNEIRKYK GEAPLDAAQF
LKMVREKAKL VSMNDSLLKR ALNEGFSGGE KKRNEVFQMA VLEPKLAILD ETDSGLDIDA
LRIVAEGVNS LRSPERSTIV VTHYQRLLDY IVPDYVHVLY KGRIVKSGPK ELALELEEKG
YDWIKAEVEA VG