Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5765 |
Symbol | |
ID | 8229381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6926635 |
End bp | 6927777 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644933610 |
Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
Protein accession | YP_003090118 |
Protein GI | 255039497 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.484985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.789674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCAT CCCGAATAGG AATTCTCGGC GGCGGGCAAC TAGGGCTCAT GCTCCTGCAA GCAGCCGTTG ACTGGAACCT CGATATTCAC GTACTCGACC CCGACGCCGA AGCGCCGTGC CGCAAAATAG CGCCCCACTT CACGCAAGGC TCCCTGCAAG ATTTTGATAC TGTCTACAAT TTCGGCAAAG ACCTGGACGT CATTACCATC GAAATTGAAA AGGTAAATGT AGAAGCGCTC GAAGCGCTTG AAAAGGAAGG CAAGAAGGTC TACCCGCAGC CGTCGGTCAT CCGTCAGATC CAGGATAAGC GTATTCAAAA GCAGTTTTAC ACCGAAAAGG CACTTCCTAC CGCCGAATTT ATCCTCACCG AAAACCGCCA GGACGTTTCA AACTTCATTT CGTTTCTTCC TGCATTCCAT AAGCTCGGCA AGGACGGCTA CGACGGCCGC GGCGTGCAAA GGCTCACTTC CGCAGCCGAT CTCGACAAGG CCTTCGACAA GCCCGGCCTG CTCGAAAAAG CCGTTGCATT TGAAAAGGAG CTCGCGGTGA TTGTAGCACG CAATGCCGAC GGCGCTATCG AAACATTCCC TACGGTTGAA ATGGTGTTCC ATCCGGAGCA TAATCTGGTG GAATACCTGT TCGCACCGGC GGAAATCAGC GCGGAAGTGA ATGCGAAAGC GCAGGAAATC GCCCGTAAGA CCGCCGAGGC ATTCCAGATC GTCGGTTTGT TGGCTGTGGA GCTATTTCTT ACGCCGGAAG GTGAAGTACT TATCAATGAA GTCGCGCCGA GGCCGCATAA CAGCGGGCAC CACACGATCC GCGCTAACGC CACGTCGCAG TATGAGCAAC ATTGGCGCGC AATCCTAAAT CTTCCCCTTG GCAGCACGCA TGCTTACGGC CCGTCGGCAA TGGTTAATTT GCTGGGCGAG GATGGCTACG AAGGTCCGGC CGTTTATGAA GGCATGGAGA AATTGCTGGC CACACCCGAA GTGTTCCCGT TCCTTTACTG GAAAGCGATC ACCAAGCCTT TCCGCAAAAT GGGGCACATT ACGATTATGG ACACGGACAT TGCTTCATTG AAGGCAAAAG CGGACTTTAT CCAGAAAAAT ATCAGAGTAA TCAGTCATAA AACGAATTCG TAA
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Protein sequence | MLSSRIGILG GGQLGLMLLQ AAVDWNLDIH VLDPDAEAPC RKIAPHFTQG SLQDFDTVYN FGKDLDVITI EIEKVNVEAL EALEKEGKKV YPQPSVIRQI QDKRIQKQFY TEKALPTAEF ILTENRQDVS NFISFLPAFH KLGKDGYDGR GVQRLTSAAD LDKAFDKPGL LEKAVAFEKE LAVIVARNAD GAIETFPTVE MVFHPEHNLV EYLFAPAEIS AEVNAKAQEI ARKTAEAFQI VGLLAVELFL TPEGEVLINE VAPRPHNSGH HTIRANATSQ YEQHWRAILN LPLGSTHAYG PSAMVNLLGE DGYEGPAVYE GMEKLLATPE VFPFLYWKAI TKPFRKMGHI TIMDTDIASL KAKADFIQKN IRVISHKTNS
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