Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5764 |
Symbol | |
ID | 8229380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6926137 |
End bp | 6926628 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644933609 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_003090117 |
Protein GI | 255039496 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.738926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGGGA TTATCATGGG CAGCCTTTCT GACAGAAAGG TGATGCAACT GGCCGCAGAC GCATTGACGG AGCTGGGCAT TTCGTATGAG ATGGAGATCG TATCCGCACA CCGCACGCCC GAGCGCATGC TCGAGTACGG CGCTTCTGCG CGCAGCCGCG GGTTACGGGT GATCATCGCC GGAGCAGGCG GTGCGGCCCA TTTACCGGGA ATGGTGGCTT CGTTAACATC GCTGCCAGTA ATCGGCGTGC CGGTGCTGTC GAGCAACTCG ATCGACGGCT GGGACTCGGT GCTGTCGATC CTGCAAATGC CGGCGGGGGT ACCCGTTGCC ACGGTGGCGC TGGATGGTGC TCGGAACGCC GGAATCCTTG CCGCCCAGAT CATCGGCGCA AGTGACGAAG CGGTTGCAAA ACGGCTTGAT GCATTCAAAG AAAGCCTTAA AGAGAAAGTG GCGGTGATGA ACGAGGAATT GAAAAATCAA CTTGGAAACT AG
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Protein sequence | MVGIIMGSLS DRKVMQLAAD ALTELGISYE MEIVSAHRTP ERMLEYGASA RSRGLRVIIA GAGGAAHLPG MVASLTSLPV IGVPVLSSNS IDGWDSVLSI LQMPAGVPVA TVALDGARNA GILAAQIIGA SDEAVAKRLD AFKESLKEKV AVMNEELKNQ LGN
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