Gene Dfer_5764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5764 
Symbol 
ID8229380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6926137 
End bp6926628 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content58% 
IMG OID644933609 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_003090117 
Protein GI255039496 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.738926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGGGA TTATCATGGG CAGCCTTTCT GACAGAAAGG TGATGCAACT GGCCGCAGAC 
GCATTGACGG AGCTGGGCAT TTCGTATGAG ATGGAGATCG TATCCGCACA CCGCACGCCC
GAGCGCATGC TCGAGTACGG CGCTTCTGCG CGCAGCCGCG GGTTACGGGT GATCATCGCC
GGAGCAGGCG GTGCGGCCCA TTTACCGGGA ATGGTGGCTT CGTTAACATC GCTGCCAGTA
ATCGGCGTGC CGGTGCTGTC GAGCAACTCG ATCGACGGCT GGGACTCGGT GCTGTCGATC
CTGCAAATGC CGGCGGGGGT ACCCGTTGCC ACGGTGGCGC TGGATGGTGC TCGGAACGCC
GGAATCCTTG CCGCCCAGAT CATCGGCGCA AGTGACGAAG CGGTTGCAAA ACGGCTTGAT
GCATTCAAAG AAAGCCTTAA AGAGAAAGTG GCGGTGATGA ACGAGGAATT GAAAAATCAA
CTTGGAAACT AG
 
Protein sequence
MVGIIMGSLS DRKVMQLAAD ALTELGISYE MEIVSAHRTP ERMLEYGASA RSRGLRVIIA 
GAGGAAHLPG MVASLTSLPV IGVPVLSSNS IDGWDSVLSI LQMPAGVPVA TVALDGARNA
GILAAQIIGA SDEAVAKRLD AFKESLKEKV AVMNEELKNQ LGN