Gene Dfer_5755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5755 
Symbol 
ID8229371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6913661 
End bp6914113 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content50% 
IMG OID644933600 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003090108 
Protein GI255039487 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.417412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.222784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAG TAATCCAGCG CGTCAGCAGC GCTTCGGTGA CTATCGACGG AAAAGTGAAG 
GGACAGATTC AAACCGGCTT TATGGTGCTG CTGGGCATAA CACGTTCCGA TTCGCAGGAG
GATATCGAAT GGCTGGGAAG GAAAATTATT GGCTTGCGCG TGTTTAATGA TCAGGAAGGG
AAAATGAATC TTGATTTAAA AGCAGTCGAC GGTGATATCC TGCTGATCAG CCAGTTCACG
CTGCACGCGA GCACAAAAAA AGGCAACCGC CCCTCATTCA TCGAAGCCGC CAGACCGGAA
ATCGCAATTC CCCTCTATGA AAAGATGATC GCATTCCTAG GCCAAGAGGT CGGAAAGCCC
ATTCAGACAG GAAAATTCGG TGCGGATATG AAAGTGGCGC TGCTCAACGA CGGCCCGGTC
ACCCTCGTCA TCGACTCAAA AAACAGGATT TGA
 
Protein sequence
MIAVIQRVSS ASVTIDGKVK GQIQTGFMVL LGITRSDSQE DIEWLGRKII GLRVFNDQEG 
KMNLDLKAVD GDILLISQFT LHASTKKGNR PSFIEAARPE IAIPLYEKMI AFLGQEVGKP
IQTGKFGADM KVALLNDGPV TLVIDSKNRI