| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5752 |
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| Symbol | sucA |
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| ID | 8229368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6908589 |
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| End bp | 6911351 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644933597 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_003090105 |
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| Protein GI | 255039484 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.18577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0679634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAT ACACTTATAT AGCAAATTCC GACGCCGCTT ATATTGAAGA ATTGTACAAT
TCTTATAAGC AAGATGCAGC CTCCGTGGAC GAGGGCTGGC AGAAGTTTTT TGAAGGTTAT
GATTTTTACC AAAAATATCC GGTATCCGGC AACGGTCACG CTAATGGCTC CGCCAACGGC
AAAGAAGCAT CGGTAGCCGG CAAAGCCGAT CCTGCGCGCA TCCGCAAGGA AATGGAAGTG
GTGCATTTGA TCCGCGGATA CAGGTCGAGA GGCCACCTGC TGGCGACCAC GAACCCGATC
CAGAAAAGGA AAGACCGCCG CCCGCAATTG GACATTGCTG ATTTTAATCT GGGACCCGAA
GACCTCGATA CTGTTTTTGA AGCCGGTATT GAGGTCTTTG ATCGTCCGGC CACCCTGCGT
GAGATCGTGG ACGCACTGAA AAAGATCTAC GCAAGCAATA TTGGTTTTGA ATACCTCTAT
ATCCGCGACC GCGAGCAAAA AAGCTGGTTG CGCAAAAAAA TCGAGAAGGA AGCATTGACT
ATGTCATTCT CGATCGATGA GAAAAAACAC ATTCTTTCAA AACTGAACGA GGCGGTTGTT
TTTGAAAACT TCCTGCATAC AAAATACCTC GGTCAGAAAC GCTTTTCGCT CGAAGGTGGT
GAAACGACCA TCCCCGCGCT CGACGCGATG ATCAATAAAG CCGCCGAAAT GGGCGTGGTG
GAAGTGATGA TCGGTATGGC GCACCGCGGC CGCCTGAACG TGCTCGCGAA TATCATGCAG
AAAACCTACG GACAAATCTT CAATGAGTTC GAAGGGAACC TGCCCGACCA GGTTTGGGGA
GACGGCGACG TGAAATACCA CATGGGTTTT GCGAGCCAGA TCACCACCAA AGATGGTAAT
AAAGTGCATT TGAAGCTCGC CCCGAACCCA TCGCACCTCG AAGCGGTGAA CCCGGTGGTG
GAAGGTTACG TCCGCGCCCG CGCCGATGGC ATGTACGATA GCGATTACGA TCGCGTATTG
CCCGTTCTGA TCCACGGCGA CGCTGCTGTG GCCGGCCAGG GTATCGTGTA TGAAGTAACC
CAGATGTCGG GATTGAACGG CTACTACACG GGTGGTACGA TCCATTTTGT GATCAATAAC
CAGGTTGGTT TTACCACCGA CTTTGTGGAT GCACGTTCGT CGATTTACTG TACGGACATC
GCCAAAATCG TGGATGCACC TGTATTGCAC GTCAATGGCG ACGATCCGGA GGCGGTGGTG
TATTGTATGC GCCTTGCGGT GGAGTACCGT CAGAAATTCA ATAAGGACAT TTTTATTGAT
ATGGTTTGTT ACCGCCGTCA TGGACACAAT GAGGCGGATG AACCGAAATT TACGCAGCCG
GTTCTGTACA AATCGATCGA TAAGCATCAG AACCCGCGCG AAATCTACCA GAAAACGCTC
GCAGAACGGG GTGACGTGGA TGCACAGCTG GCCGATACCA TGGATAAGGA GTTCAAGCAA
CTATTGCAGG AACGCCTCGA TATGGTGAAG CAAAAAGCAT TGCCTTACAC GCTTCCGAAA
CTGGAAGAAG AGTGGCACAA GCTGCGTAAG TCGAAACCGG AAGATTTTGA AAAATCGCCC
GAAACCGGCG TGCCGCTGGA ACAGTTGGAA AAAATTGGTC AGGCGCTGAT CAAAACGCCC
GAGAATTTCA ACAGGCTGAA ACAAATCGAT AAGCTGCTCA AAGACCGTGA GCAGATGATT
TTTGATAAAA AAGAAGTAAA CTGGGCCACT GCCGAATTGC TCGCTTACGG TTCGATCCTC
GCGGAAGGCA ACATCGTTCG ATTGAGCGGT CAGGATGTGC AGCGCGGTAC ATTCTCGCAC
CGCCACGCAG TATTGCGCGA TGTGGAAACC AATGCGGCAT ACAATAGCTT GCAGCACATT
CAGGAAGGCC AGGGCCAGTT CATGATTTAC AACTCCCTGC TTTCGGAATA TGGTGTTCTC
GGGTTCGAAT TCGGTTACTC AATGGCCAAT CCGAATGCAC TGGTGATCTG GGAAGCGCAA
TTTGGTGACT TTGCCAATGG CGCGCAGGTG ACGATCGACC AATTCGTAAC ATCGAGCGAA
ACCAAATGGG ATCGCTGGAC AGGGCTGGTG ATGTTGTTGC CGCACGGTTA CGAAGGGCAA
GGTCCAGAAC ACTCGAATGC CCGTCCGGAG CGCTATTTGC AGCTTTCGGC CAACTATAAC
ATTATTGTAG CGAACGTTAC CACGCCAGCC AACTTCTTCC ACTTGCTGCG CCGTCAGTTG
AAATTCCCGT TCCGCAAGCC GTTGATCGTA ATGTCGCCGA AGTCGATGCT GCGCCACCCG
CTTTGCGTTT CGCCGGTCGA CAGCCTGGTG AGCGGTACTT TCCAGGAAAC CATCGGCGAT
ACTTTTGCTG ATCCGAAGAA AGTGAAGAAA GTGTTGCTTT GCACCGGCAA GCTGTATTAC
GAACTATACG AAAAACAGCA GGCCGACAAG CGTGACGACG TGGCGATCAT CCGTCTGGAA
CAAATGCACC CGTTCCCGCA AACGCAGATC GACGCACACC TGAGCCAGTA TGAAAATGCA
AGTGTGTACT GGGTACAGGA AGAGCCCTTC AACATGGGAG GATGGACGTT CATGCTGCGC
ATGTACAAAG GCGTGAAGCC GTTGCAGGTA ATCGCCCGCG AACCAAGCGC GTCGCCTTCG
ACTGGTTTCT CGAAAATCCA TGCGAAAGAG CAGGCCGAGA TTATCAGCAG AGCTTTTGAA
TGA
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| Protein sequence | MDKYTYIANS DAAYIEELYN SYKQDAASVD EGWQKFFEGY DFYQKYPVSG NGHANGSANG
KEASVAGKAD PARIRKEMEV VHLIRGYRSR GHLLATTNPI QKRKDRRPQL DIADFNLGPE
DLDTVFEAGI EVFDRPATLR EIVDALKKIY ASNIGFEYLY IRDREQKSWL RKKIEKEALT
MSFSIDEKKH ILSKLNEAVV FENFLHTKYL GQKRFSLEGG ETTIPALDAM INKAAEMGVV
EVMIGMAHRG RLNVLANIMQ KTYGQIFNEF EGNLPDQVWG DGDVKYHMGF ASQITTKDGN
KVHLKLAPNP SHLEAVNPVV EGYVRARADG MYDSDYDRVL PVLIHGDAAV AGQGIVYEVT
QMSGLNGYYT GGTIHFVINN QVGFTTDFVD ARSSIYCTDI AKIVDAPVLH VNGDDPEAVV
YCMRLAVEYR QKFNKDIFID MVCYRRHGHN EADEPKFTQP VLYKSIDKHQ NPREIYQKTL
AERGDVDAQL ADTMDKEFKQ LLQERLDMVK QKALPYTLPK LEEEWHKLRK SKPEDFEKSP
ETGVPLEQLE KIGQALIKTP ENFNRLKQID KLLKDREQMI FDKKEVNWAT AELLAYGSIL
AEGNIVRLSG QDVQRGTFSH RHAVLRDVET NAAYNSLQHI QEGQGQFMIY NSLLSEYGVL
GFEFGYSMAN PNALVIWEAQ FGDFANGAQV TIDQFVTSSE TKWDRWTGLV MLLPHGYEGQ
GPEHSNARPE RYLQLSANYN IIVANVTTPA NFFHLLRRQL KFPFRKPLIV MSPKSMLRHP
LCVSPVDSLV SGTFQETIGD TFADPKKVKK VLLCTGKLYY ELYEKQQADK RDDVAIIRLE
QMHPFPQTQI DAHLSQYENA SVYWVQEEPF NMGGWTFMLR MYKGVKPLQV IAREPSASPS
TGFSKIHAKE QAEIISRAFE
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