Gene Dfer_5743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5743 
Symbol 
ID8229359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6898385 
End bp6899164 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content51% 
IMG OID644933588 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003090096 
Protein GI255039475 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.044378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACT CAAATTGGAA GATCGGATTA TTTATTCCGT GCTATGTAGA TCAATTTTAC 
CCGCAGGTAG GGATTGCAAC ACTGGAACTG CTTGAAAAAC TGGGCTGTAC GGTCACATTT
CCGCTGAACC AGACGTGCTG CGGCCAGCCG ATGGCCAACT CCGGATTCGA ACACCTGTCG
CGCTCGTGCG ACAATCTCTT TTACGATCAG TTCAAAGATT GCGACTACGT GGTTTCGCCG
TCGGGAAGTT GTGTGCTGCA CATTAAAGAC CATTTGAAGG CCGATAACAA GGCCGACGAA
TCGAAAGTGC TGAGAAAGAG GGTTTACGAA CTGGTCGAAT TTCTGACCGA CGTTTTGAAA
ATAGATCGCA TTGAAGCGGA ATTTCCGCAT CGCGTGGGCT TACATCAGGG TTGCCACGGG
CAGCGCGGGC TGCATTTGTC CCAAATGTCG GAGCTGAATG CGGCGCCGTA CTCGAAGCCG
GTATCGCTTT TGAAACAGGT AAAAGGCATC GAGCTGATCG ACCTCGACCG CACGGATGAA
TGCTGCGGGT TCGGCGGGAC GTTTTGTGTG AGCGAGGAAG CCGTGTCCGT GAAAATGGGC
AAGGACCGCG TCGCCGATCA CATTCGCCAC AATGCGGAAT ATATTACCGG CTCCGATATG
AGCTGCCTCA TGCATTTGGG CGGCATTCTG AAGCGCGGTA ATTCGAATGT GCAGGTGAAG
CACATTGCGG AAATTTTGAA TGCCAGTATC TCAAAAAGAA AACCAGAGCC CGCTTATTGA
 
Protein sequence
MSYSNWKIGL FIPCYVDQFY PQVGIATLEL LEKLGCTVTF PLNQTCCGQP MANSGFEHLS 
RSCDNLFYDQ FKDCDYVVSP SGSCVLHIKD HLKADNKADE SKVLRKRVYE LVEFLTDVLK
IDRIEAEFPH RVGLHQGCHG QRGLHLSQMS ELNAAPYSKP VSLLKQVKGI ELIDLDRTDE
CCGFGGTFCV SEEAVSVKMG KDRVADHIRH NAEYITGSDM SCLMHLGGIL KRGNSNVQVK
HIAEILNASI SKRKPEPAY