| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5739 |
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| Symbol | |
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| ID | 8229355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6895526 |
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| End bp | 6896389 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933584 |
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| Product | 5-oxopent-3-ene-1,2,5- tricarboxylatedecarboxylas e |
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| Protein accession | YP_003090092 |
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| Protein GI | 255039471 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.591316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0494696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT TTCGATTTGG TGCATTTGAA AATGAGAAGC CGGGTGTAGA ACTGGCGGAC
GGTACAAAGC TGGATGTTTC GGCATTTGGT GAAGATTACA ACGAGAAATT TTTCGCGACA
GACGGCCTTG CGCGTCTTGC GGGCTGGCTG GAAACGAATG CGGCTTCTGC GCCGAAAGTG
GAAGAAGGTT TCCGCTACGG ATCGTGCATC GCGCGTCCTT CGAAGATCGT CTGCATTGGG
ATGAATTATG CCAAGCACGC CTACGAGTCA GGCGCGACGG AGCTGCCCAA AGAGCCGATC
ATTTTCTTTA AATCCACGTC CGCATTGTGC GGTCCATTCG ACCAGGTGGT TATCCCGAGA
AATTCGGAGA AAACCGACTG GGAAGTGGAG CTGGCCGTGA TCATCGGCAA AAGAACCAGC
TACGTGGACG AGGCCAATGC GTTGGATTAT GTGGCAGGTT ACGCCGTTCA TAACGACTAT
TCGGAACGCG CGTTCCAAAT GGAGCGGGGC GGACAATGGG TGAAAGGTAA AAGTAATGAT
ACCTTCGCGC CGCTGGGCCC TTACCTGGTC ACTTCCGACG AAGTAGGCAA TGCTAATGAC
CTCGATTTAT GGCTCAGCCT GAACGGCAAA AAGATCCAGG ACAGCAATAC GTCAGATATG
ATCTTCCACA TTCCGTTCCT CGTGAGCTAC CTGAGCCAGT TCATGACGCT CCTTCCGGGA
GACGTGATCA CCACCGGTAC TCCTGCGGGC GTCGGCCTGG GCATGAAGCC GCCGGTTTAC
CTCAAAGCAG GCGACGTGGT AGAATTGGGT ATTCAAAAAT TAGGAGCTCA AAAACAGGAA
GCGATTGCCT GGAAAGCGGT TTAA
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| Protein sequence | MKLFRFGAFE NEKPGVELAD GTKLDVSAFG EDYNEKFFAT DGLARLAGWL ETNAASAPKV
EEGFRYGSCI ARPSKIVCIG MNYAKHAYES GATELPKEPI IFFKSTSALC GPFDQVVIPR
NSEKTDWEVE LAVIIGKRTS YVDEANALDY VAGYAVHNDY SERAFQMERG GQWVKGKSND
TFAPLGPYLV TSDEVGNAND LDLWLSLNGK KIQDSNTSDM IFHIPFLVSY LSQFMTLLPG
DVITTGTPAG VGLGMKPPVY LKAGDVVELG IQKLGAQKQE AIAWKAV
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