| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5733 |
|---|
| Symbol | |
|---|
| ID | 8229349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6887948 |
|---|
| End bp | 6889219 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644933578 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_003090086 |
|---|
| Protein GI | 255039465 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.855875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0926038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA TTACCACGCC CCTCGCCGAA CGCCTCCGCC CGCGGACGCT CGACGATTTT
GTGGGGCAGG AAAAGCTGCT CGGCCCGAAA GGTCCGTTAA GGCGCGCCAT TTTACAGAAT
GCAATCCCCT CGATGATTTT CTGGGGACCG CCCGGTGTGG GGAAAACTAC CCTCGCATTG
CTCATCGCCG AAACAACCAA ACGGCAATTC TACAACCTCA GCGCGATCAG TTCCGGCGTG
AAAGATCTGC GCGAGGTGCT GGCACGGCCT TCGGGCTTGT TCCCGGCCAT TTTGTTTATT
GATGAAATTC ACCGCTACAA TAAAAGCCAG CAGGATGCAT TGCTGGGAGC GGTTGAGAAA
GGTCAGGTAA CGCTGATCGG CGCCACAACG GAAAATCCGT CATTTGAAAT CAACTCCGCA
TTGCTCTCGC GGTGCCAGGT ATATATCCTG GAAGCATTTG GTGAAAAGGA ATTGAAAGGC
CTCATTGCCC GTGCATTGGA AAAAGATCCG TGGCTGAAAG AGAAGAATAT CAAATTCGCA
TCCTATGACG CGCTGATGCG GCTTTCGGGC GGTGACGGCC GTAAACTGCT CAACCTCCTC
GAACTGGTGG TGCTGGGTAA GGGTGACGCC AAGAAGATTG AAATCACCGA TGAATGGGTG
ACCGAGGTAG CGCAGCAGAA CATTGCTCGA TACGACAAAT CGGGCGAGCA GCATTATGAT
ATCATTTCCG CATTCATCAA ATCACTCCGC GGCAGCGATC CCAATGGGGC CGTGTACTGG
ATGGCCCGGA TGATCGTCGC GGGTGAAGAT CCGTCGTTTA TAGCCCGCCG GATGCTCATT
ATGGCCTCAG AGGACATCGG TAATGCCAAC CCCACGGCGA TGATCATGGC CAATGCCTGC
ATGCAGGCCG TGAATGTGAT CGGCTATCCC GAATGCCGCA TCATCCTTTC GCAAACGGCC
GTGTACCTGG CCACGTCGCC CAAAAGTAAT GCGAGCTACA TGGCGATCGG CGAGGCTATC
GAGGCGGCTA CGCGCACCGC GCACCTGCCT GTGCCTTTGC ACCTGCGTAA TGCGCCTACG
AAGCTGATGA AGCAGATCGG CTACGGCAAG GATTATAAAT ACTCGCACAG TTACGAGGGA
AATTTCGCGA AGCAGGATTT CCTGCCCGAC GAGCTGAAAG GGACGCGGTT TTTCGAGCCC
GGGCACAATT CGCGCGAGGA AGAAATCCGG AAAAAGTTGC AGCACTGGTG GGGCGACTGG
TACGGCTACT GA
|
|---|
| Protein sequence | MNTITTPLAE RLRPRTLDDF VGQEKLLGPK GPLRRAILQN AIPSMIFWGP PGVGKTTLAL
LIAETTKRQF YNLSAISSGV KDLREVLARP SGLFPAILFI DEIHRYNKSQ QDALLGAVEK
GQVTLIGATT ENPSFEINSA LLSRCQVYIL EAFGEKELKG LIARALEKDP WLKEKNIKFA
SYDALMRLSG GDGRKLLNLL ELVVLGKGDA KKIEITDEWV TEVAQQNIAR YDKSGEQHYD
IISAFIKSLR GSDPNGAVYW MARMIVAGED PSFIARRMLI MASEDIGNAN PTAMIMANAC
MQAVNVIGYP ECRIILSQTA VYLATSPKSN ASYMAIGEAI EAATRTAHLP VPLHLRNAPT
KLMKQIGYGK DYKYSHSYEG NFAKQDFLPD ELKGTRFFEP GHNSREEEIR KKLQHWWGDW
YGY
|
|---|
| |