Gene Dfer_5722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5722 
Symbol 
ID8229338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6876246 
End bp6877340 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content54% 
IMG OID644933567 
Producthypothetical protein 
Protein accessionYP_003090075 
Protein GI255039454 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC AGGTTTCGCA GGCATATGCG CAGGACGGCT GGTTCAGGCG TTTTGTACAA 
AAAACAATTT CAGATACGAC GGGCGAAGGA AAATCGAGCT TTCGCGTGTA CCCTACATTG
GGTTACGCGC CCGAGACGAG CGTGGAGGTG GGGCTGTCCT CGCTGCTGCT TTTTCAGGCC
AAAGGCGATA CGCTCAACCG CCTGAGCGAA GTAGCGGCAT TTACATTCGT CACGCTCGAA
GGACAGTACG GTATTTGGCT CGACAATGCA ATTTACGGGG ATAAAGACAA GTGGTTCTTC
CTCGGACGGA CGCGTTTCCA GCGCTTCCCC TTGCTGTATT ACGGGATCGG GCACACCACG
CCCGAAGCCG AGCCGGCATT GATCGACGCG AACTACCTGC TTTTCCGGCA ACGCGTGCTC
CGGCGCATCA GGCCGAACTT CTTTATCGGC CCGGAAGTCG ACTATCAGCA GCTATATAAT
GCGAAATTCA AACAGCCCGA GGGTCATTTC TATGACGAGC CGAAGGGTAG CCAAGGCACG
CTCAATATCG GCCTGGGAGC GGCGGTGGTG TATGATAACC GCCATAATGT GCTCAATGTC
CGCAAAGGTT TGTTTGGGGA ATTGTCTTTT CTGAAATACA ACCGTTCGCT CGCCAGCGAC
TATAATTTCC AGGGCTTTAA CCTGGATGTC CGCAGTTCGC ACCCGCTAAC ACGCCGGAAT
GTATTGGCCT GGCAGATCTA CGGTAACTTT TTTACGGGTA ATGTGCCATT TAATCAAATG
GCTCTGATGG GCGGGGAAAT GATCATGCGC GGTTACTATT ATGGTCGCTA CCGCGACAAA
AACATGCTGG CCACGCAGGT AGAGCATCGC TGGCTGCCGT TCGGGTTCAG CAAGCGGTTT
GGCGGCGCGG TATTCGCGGG AGCGGCAGTG GTAGGGCCGA AGATCGGTTC GCTTACACCC
GCGCGGGCAC GGCTGTCTGG CGGCGTTGGT CTGAGATATT TATTGTTTCC CAAAAAAGAC
ATTTTCCTGC GGCTGGACGT CGGTTTTACG AAGGACGGAC CCGGTTTTTA CCTTTTTACA
GGCGAAGCGT TTTAG
 
Protein sequence
MAIQVSQAYA QDGWFRRFVQ KTISDTTGEG KSSFRVYPTL GYAPETSVEV GLSSLLLFQA 
KGDTLNRLSE VAAFTFVTLE GQYGIWLDNA IYGDKDKWFF LGRTRFQRFP LLYYGIGHTT
PEAEPALIDA NYLLFRQRVL RRIRPNFFIG PEVDYQQLYN AKFKQPEGHF YDEPKGSQGT
LNIGLGAAVV YDNRHNVLNV RKGLFGELSF LKYNRSLASD YNFQGFNLDV RSSHPLTRRN
VLAWQIYGNF FTGNVPFNQM ALMGGEMIMR GYYYGRYRDK NMLATQVEHR WLPFGFSKRF
GGAVFAGAAV VGPKIGSLTP ARARLSGGVG LRYLLFPKKD IFLRLDVGFT KDGPGFYLFT
GEAF