Gene Dfer_5717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5717 
Symbol 
ID8229333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6870891 
End bp6872087 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content55% 
IMG OID644933562 
Producthypothetical protein 
Protein accessionYP_003090070 
Protein GI255039449 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACCA CCACCAGTAC CCTCACCAAC CGTATCCGGT CGATCGACAC CGTGCGGGGC 
CTGATCATCA TCATCATGGC CCTCGACCAC GTCAGGGACT TCTTTCACAT TGCCGGCGCC
ACCGGCGACC CCACCGACCT GGCCACCACA ACGCCCGCAT TGTTTTTCAC GCGTTGGATC
ACGCATTACT GCGCGCCAAG TTTCATGATG CTTTCGGGCC TGTCCGCTTA TTTATCGGGC
ATTAACAAGA CGCCGGGCGA GAAATCATCT TTCCTCATCA AGCGCGGTTT CTGGCTTATT
CTCGTGGAAA TGGTGTTCAT GACCTTCGCA TTTACATTCG ATATTTATTA CAAAACGCTC
TTTTTCGCCG TATTCTGGGC GCTGGGCGGC GCAATGATCG TGCTCGGCAT CGCGGTGCGT
TTTGCATCGC CGAAAACGAT CCTCATCCTG GGGCTGGCGC TGGTGCTCGG GCACAACCTG
CTGGATTACG TGAAATTGCA GGAGAATTCC ACTGCGGACA TTCTGTTGCG CATATTCTTC
ACCGGTAGGG GCACGTTCCT GCCACGGCCC GATGGCGGCG CGATCGTCTT TCTGTACGTG
ATTTTCCCCT GGGCGGGCAT TATGATGTCG GGGTATGGGC TTGGCATGCT CTACAAGCGC
AATGCCGATC CGCAGCGGCG CAGGAAGCTG CTATTGTGGA CCGGCGCGGC GCTGACGGCG
TTGTTTGTGC TATTGAGATT CATCAATGGC TATGGCGATC CTGCTCCCTG GTCGTCACAG
GACACCGCCG CCAAAACTTT CATATCCTTC TTCAACGTGA CCAAATATCC GCCTTCGCTG
CTATTCACGC TCATGACGCA GGGGCCGATA CTCATCCTGC TCGCCCTGAC CGAGCAAACG
GACAATGCAT TCAGCCGCAT CTGCACAGTG TATGGCCGGG TGCCGTTCTT CTTTTTCCTC
GTGCATTTTT ATGTAATCCA TATCATGACG ATGGTGACCG TCTTCCTGTC CGGCTACACC
TGGCAGCAGG CTACGGACGA TAGCCTGTTT TTCAAATTCC GGCCTAATGA ATTCGGCTAC
CCGCTCAGGC AAACTTATCT GATCTGGATT TTAATTGTGG TAGCGCTCTA TTGGCCCTGC
AAATGGTATG GCGAATACCG GGCCCGTAAG CGCACCTGGT GGCTCAGCTA TTTGTAA
 
Protein sequence
MYTTTSTLTN RIRSIDTVRG LIIIIMALDH VRDFFHIAGA TGDPTDLATT TPALFFTRWI 
THYCAPSFMM LSGLSAYLSG INKTPGEKSS FLIKRGFWLI LVEMVFMTFA FTFDIYYKTL
FFAVFWALGG AMIVLGIAVR FASPKTILIL GLALVLGHNL LDYVKLQENS TADILLRIFF
TGRGTFLPRP DGGAIVFLYV IFPWAGIMMS GYGLGMLYKR NADPQRRRKL LLWTGAALTA
LFVLLRFING YGDPAPWSSQ DTAAKTFISF FNVTKYPPSL LFTLMTQGPI LILLALTEQT
DNAFSRICTV YGRVPFFFFL VHFYVIHIMT MVTVFLSGYT WQQATDDSLF FKFRPNEFGY
PLRQTYLIWI LIVVALYWPC KWYGEYRARK RTWWLSYL