Gene Dfer_5710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5710 
Symbol 
ID8229326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6864350 
End bp6865099 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content51% 
IMG OID644933555 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003090063 
Protein GI255039442 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.80532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGT ATGCGTTTTT TAACTACAAA TTTTGTACCC TTTCGATACC TACTATGATC 
GCAGTGCGTC ATTTCAAAAC ATTTGTAACA TTATCCCTGC TCGCGACCGT ACTGTTTTCG
TGCGGCGGCG AGAAAAAAGA GGAGGCGGCT CAGGATGCCG GTTCCACACA AACTGCGGCA
AAAGCAACGC CCGCGAAAAA GAAAACGATC GTTTTTTTTG GCAACAGCCT CACCGCCGGT
TACGGCCTCG ATGATCCGTC ACAGGCATTT GCCGGACTGA TCCAGAAACG CATCGACTCG
CTCGGCCTGA ACTACAAGGT CATCAATGCC GGAGTGAGCG GTGAAACCAC ATCGGGCGGG
AATAGCCGCA TCGACTGGCT GCTCAAACAA CCGCTCGACG TTTTCGTTCT CGAACTAGGC
GGCAACGACG GCCTGCGGGG CATTCCGGTT TCAGAAACGA AGAAAAACCT GCAAGAGATC
CTGGACAAGG TAAAGGCGAA ATATCCGGAT GCGAAACGCG TGCTGGCAGG AATGCAAATC
CCGCCAAACA TGGGCCAGAA ATACGCAACG GAATTTAAAG AAGTATATGC TGATCTTGCC
GAGAAGAACG ATGTAACGCT CATCCCATTC CTGCTCGAAG GGGTGGGAGG CGAGTCCAAA
CTGAACCAGT CCGACGGCAT TCACCCCACC GCGGAAGGGC ACAAGATACT GGCCGAAAAT
GTGTGGATAA GGATTAAAGA CATATTATAA
 
Protein sequence
MAGYAFFNYK FCTLSIPTMI AVRHFKTFVT LSLLATVLFS CGGEKKEEAA QDAGSTQTAA 
KATPAKKKTI VFFGNSLTAG YGLDDPSQAF AGLIQKRIDS LGLNYKVINA GVSGETTSGG
NSRIDWLLKQ PLDVFVLELG GNDGLRGIPV SETKKNLQEI LDKVKAKYPD AKRVLAGMQI
PPNMGQKYAT EFKEVYADLA EKNDVTLIPF LLEGVGGESK LNQSDGIHPT AEGHKILAEN
VWIRIKDIL