| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5703 |
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| Symbol | |
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| ID | 8229319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6852407 |
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| End bp | 6854977 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933549 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_003090057 |
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| Protein GI | 255039436 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.411569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTTG GCGAGCTCGG TGCAGCACCT TCCATTGGCA TTAAGCCCGC GCCGTCGTGG
GTGGTTCCGG TAACGCCCGG CGGGAAGCCA GCGGGTGCCA AAGACTTTTC CAACGGCTTT
TACATTGCTT TTTCCGACAC ACAAACCAAT CTCGATGAGC AAACGGTTTA CCGGCGGGTA
ATCAGGCAAA TCGTTTCGGA AAGCGGCGTG CAGAATGGCT CCGAAATGAT CATCGCATTT
GACCCTTCCT ACGAGCGCCT GAATGTGCAC AGCCTGATCG TCTGGCGTGA CGGCGTGGCG
ATGTCGCGGC TCAACCTGGC TGATTTCAAA GTAATCCCCG TAGAAACGGA CCGGCAGCGG
TTTATTTACA ACGGATACCA TACCGCGTCG GTGATCCTGA AAGACATCCG CAAAGGCGAC
CGCATCGAGC TCGCCTACTC GTGTACGGGC TGGAATCCGG TTTTTAAAGG GAAGTACTCC
GACTTTTTCT CCTTCGCGAC CGGCGATTAT CTCGGACATG TGCACGTGGC CGTTCTCGCG
AAAGCTGGTC GGGCGGTTTA TACCAAAGAC TTCAACAAAC CGCCTGCCCG CAAGGAGCAC
ACGCAGAACG GCCTGCGGAT ATACGAATGG GACGCGCGGA ATATCAAAAG GATTTCCTAC
CAGGAAGACA GGCCCAGTTG GTACGACGAA ACCCCTTCGG TGCAGGTTAC GGAGTTTAAG
AACTGGAAAG AAGTGGTCGA CTGGGGATTG AATTTTTACA GCATTCCCAC CGTTTCGGGC
GCTTTAAAAG CGAAAGTGGA TGAATGGAAA CGCACCTCGG AAAGCCGCCT CGATTACATT
GAAAAAGCCG TGCGTTTCGT GCAGGACGAT GTGCGGTACC TCGGTATCGA AACGGGTGAA
AACTCGCACA GGCCGCACAA AGCCGAGGAC GTTTTCAACC AGCGGTACGG CGATTGCAAG
GACAAAACAC TTCTGCTTTG CGCTATTTTG AATGCCAATG GCGTCGAGGC GTCGCCGGTG
CTGGTGGACA CCTACAAGCG CTCGCATTTG GAAGACTACC TGCCGTCGCC CGCCGACTTT
AATCATGTGG TGGCGCGGGT GCTGATGCAC GATTTGGAAA ACCGCGCGCC CGAGGCACGC
GATTATGTGT TTGTTGACCC GACGATCGCA TTGCAGGGCG GCGCGATCCC GCAGACTTCC
TTCGCTGCTT ACGGTTATGG ATTATTGTTG AAAGAAAGGC AAAGCAAGCT GCTCCATATG
GAGGCGCAGA ACCCCGGTTC GACGGAAATT ACGGAGGATT TTTACCTCCC GGCGATGGGC
GATACCATTT CCGGCGGCGT GTTGCAGGTG AAAACGGTGT ATTTCAATCA CGATGCCGAA
AATTTCAGAA GCACATTACA GGAATCTGTG TTGTCGGAGC TTGAAGATTC GTACTTTAAT
TTTTACGCTG AACTTTACAA AAACAGCGGA CTGGAACGCC TCGATTCGCT GGAATTTTAC
GATCAGCGGG AAGCCAACAA CATTTCCGTA GTCGAAAGGT ACCGGCTGAA CGATGCCTGG
CAAGTCGGCG GACAGACGGA AAACTGGTAT TTCCAGGTGC TCGGACGCAT TATGTACGAT
CATGTGCGCA CGCTGCCGGC TCGGAAGCGC AACTCGCCTG TTTTCCTCAA CTACCCGACC
AACATCACCT ACAAGGCCCG CGTACATTTC CAGGCCGACC GCGGCGTGCC GGTGGATCAG
TGGAATGTGG AGCGAATGGC TTATGATATT TCCTATAAAT CGGAGTTCCT GCCCAAAGAA
AAGGTATGGG AGCTAACCTA TGTTTTCAAA ACCAAACAAG ATCACATTCC CGCTGATCAG
GTTAGCCAGT ACAGGGAAGA CATCGAAAAG CTGACCGGAT ACCTCGAACA GCGCGTCGAC
GATAATTCCA GTCTTTTGAT CAGCTGGGGC GGGGTGAATG GGTGGATGCT TATGCTGGCA
TTGCTCACGG TGTTTTGCTG TTTCATCGCG GCCCGGAAGC TGGAACGCTA TTCGCCCGGC
GCACGTTTTC ACGCCCCGGC GGCTTCGAAG AATGGATGGC TTATCCTGAT CGGCATCGTG
ATCGTGGCTC TTTCCGTGCT GCTCCCGCTG GGACTGATGA CCGCCGAGGC GGGGTCATTC
TTCACCATTG CCGAATGGGA CCGCATGAAT GATGCGACCG GACTGAAACG CTTCGGTTAC
CAGCTTTTCC TCATTCTTCA GTGTATTTTC AGTGTCGGAT CGTGGTGTTA TGCCATTTTT
CTCTGGCGCT TGTATGCCAA GAACCGCGAT TCATTTCCTA TTATTTACAG CGGTTTTATA
TCGCTTAACC TGGCATTCAG CATTCTTTCC GTTGTGCTCA ACTATTGCTT TTCGATACCG
CAGGAGGCCA ATGCATTTGC CGGCATTCCG TTTCAGATTC TCTGGACTGC CGCTCTTACT
ACTTATATGA ACAAATCCGA GGCCGTCAGG CGCACGTTCG TGAATACCTA TGAGGATCAG
CTGGGTATCC ACGATCGGGA GGAAAGCGAG ATGGCGGAGA ATATCGAATA G
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| Protein sequence | MGFGELGAAP SIGIKPAPSW VVPVTPGGKP AGAKDFSNGF YIAFSDTQTN LDEQTVYRRV
IRQIVSESGV QNGSEMIIAF DPSYERLNVH SLIVWRDGVA MSRLNLADFK VIPVETDRQR
FIYNGYHTAS VILKDIRKGD RIELAYSCTG WNPVFKGKYS DFFSFATGDY LGHVHVAVLA
KAGRAVYTKD FNKPPARKEH TQNGLRIYEW DARNIKRISY QEDRPSWYDE TPSVQVTEFK
NWKEVVDWGL NFYSIPTVSG ALKAKVDEWK RTSESRLDYI EKAVRFVQDD VRYLGIETGE
NSHRPHKAED VFNQRYGDCK DKTLLLCAIL NANGVEASPV LVDTYKRSHL EDYLPSPADF
NHVVARVLMH DLENRAPEAR DYVFVDPTIA LQGGAIPQTS FAAYGYGLLL KERQSKLLHM
EAQNPGSTEI TEDFYLPAMG DTISGGVLQV KTVYFNHDAE NFRSTLQESV LSELEDSYFN
FYAELYKNSG LERLDSLEFY DQREANNISV VERYRLNDAW QVGGQTENWY FQVLGRIMYD
HVRTLPARKR NSPVFLNYPT NITYKARVHF QADRGVPVDQ WNVERMAYDI SYKSEFLPKE
KVWELTYVFK TKQDHIPADQ VSQYREDIEK LTGYLEQRVD DNSSLLISWG GVNGWMLMLA
LLTVFCCFIA ARKLERYSPG ARFHAPAASK NGWLILIGIV IVALSVLLPL GLMTAEAGSF
FTIAEWDRMN DATGLKRFGY QLFLILQCIF SVGSWCYAIF LWRLYAKNRD SFPIIYSGFI
SLNLAFSILS VVLNYCFSIP QEANAFAGIP FQILWTAALT TYMNKSEAVR RTFVNTYEDQ
LGIHDREESE MAENIE
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