Gene Dfer_5700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5700 
Symbol 
ID8229316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6848957 
End bp6849964 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content54% 
IMG OID644933546 
ProductPfkB domain protein 
Protein accessionYP_003090054 
Protein GI255039433 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.738338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAT ACGATCTTCT TACCCTTGGC CGCTCTTCCA TTGACCTTTA CTCGGCCAAC 
GTGGGCAGCC CTTTTGAAAA AATTGAGGCA TTCAATGCCT TTGTGGGCGG TTGCCCGCTC
AATATTGCCA CCGGAAGCCG CCGGCTGGGT CTGGAAACAG CCATTCTCAC CGGTATCGGC
AATGATCAGG TGGGGAATTT CATCAAACAT TTCCTTGACA ACGAGGGCAT TGTAACCGAC
TGGGTGCCGG TTATCGAAGG CACCCGCAGT TCGGCCGTCG TGCTGGGCAT CGAGCCGCCC
GACCGCTTTC CGCTCGTTTA CTATCGCGAA AACTGCGCGG ACATCAACCT GAATATCGAC
CACGTATCCG CCATACCGTT CCAGGATTTC AAGGCTGCTG CGTTCTCCGG GACTGCATTC
AGCAAAGATC CAAGCCGTAC CGCCATGTTC TATGCGTTGG AAATGGCGAA AAAGAATGGC
GTGACGCGTC TGCTGGACAT CGATTTCCGC GCAGATCAGT GGTTTGATCC CCGCGCATTC
GGGGTGACGA TCCGCGCGGC GTTGGGCAGC TTCAATATTG TGGTGGGAAC CGAAGAAGAA
ATACTGGCTA CGTTTTTGAC TGATAAAGAG CAGCTTCTGA TCAAACATCA GCAGATATCG
GCGCCGGAGA TCCGCGGGAA TATCGACAAT GCGATCCGGG AAATCCTGAA TTCGGGCGTT
GAAACGCTCG TGGTGAAGCG CGGCAAGGAT GGGGCGTCCA TTTTCCAGCC CGGCAAAGAG
GAAGTAAAAG TACCCGGCTT TCCAGTGGAA GTATTGAATG TGCTGGGCGC TGGTGATGCT
TTTTGTGCGG GCTTCTCGTT TGGGTTGCTG CGTGGCTGGG ATTTGTACAA GAGTGTCAGA
ATGGGTAATG CCTGCGGGGC GATCATCGTC ACCCGCGAAG GCTGCGCGAA TTTCATGCCG
ACTTATGATG AAGTAATCGG GTTTGTGGAA GGATACGGAG GATTATAA
 
Protein sequence
MPRYDLLTLG RSSIDLYSAN VGSPFEKIEA FNAFVGGCPL NIATGSRRLG LETAILTGIG 
NDQVGNFIKH FLDNEGIVTD WVPVIEGTRS SAVVLGIEPP DRFPLVYYRE NCADINLNID
HVSAIPFQDF KAAAFSGTAF SKDPSRTAMF YALEMAKKNG VTRLLDIDFR ADQWFDPRAF
GVTIRAALGS FNIVVGTEEE ILATFLTDKE QLLIKHQQIS APEIRGNIDN AIREILNSGV
ETLVVKRGKD GASIFQPGKE EVKVPGFPVE VLNVLGAGDA FCAGFSFGLL RGWDLYKSVR
MGNACGAIIV TREGCANFMP TYDEVIGFVE GYGGL