Gene Dfer_5689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5689 
Symbol 
ID8229305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6836154 
End bp6836888 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID644933535 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003090043 
Protein GI255039422 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.761782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCCTCGATTA CGTTCTAAGT ACCCTATACC TGATCCATTT CGGCATTACG 
CTAATCGTTT TCCATGTTAT CCAGGTCATC GCATTCAACG TCTTCGGAAA GAAGGCGCAC
AAGGTTTCGG TCGACTGGCT TAACTTTTTC CTCACTTTCG GACTCTATCT GACCGGCGCT
AGTATCAAGC TCAAAAACCT TGCCCAACTT CCCGACGACA GGCCCCTTAT ATTTGTAGCC
AACCACCAGA GCAGCTACGA CATTTCCGCC ATTTACTGGT ATATGCGGAA ATACAGCCCG
CGCTTCGTTT CCAAAATCGA ACTTGCAAAA GGCGTTCCGA GCATTTCCTA TAACCTCCGC
AAAAGCGGCG CGGCGCTGAT CAACCGCAAG GATGGGAAGC AGGCCATCAC CGAGATCGCG
CGGCTGGGCA AGCTGATCCA TGACGAAAAA GCCTCCGCCA TGATTTTCCC GGAAGGTACA
CGCACGGCAA GCGGCCAGAT GAAACCTTTC CAGCCCGGCG GCGTGGCAAC GCTGCTCAAA
CGCGCCCCGG ACGCGCTCAT CGTCCCGGTG GCGATCAACG GCACGGGGGC ATTCAACCCG
AAAGGAATTT TTCCTTTGAG ATCTTTCTCC AAACTCAGTT TCACTGTGCT GCCGGGTATC
GAACCGGCCG GAAGGAAGGC GGAAGAGATT TTAAATGAAG CCCAGGAAGC CATTCGTGTG
GCTATCGCAG GCTGA
 
Protein sequence
MKKILDYVLS TLYLIHFGIT LIVFHVIQVI AFNVFGKKAH KVSVDWLNFF LTFGLYLTGA 
SIKLKNLAQL PDDRPLIFVA NHQSSYDISA IYWYMRKYSP RFVSKIELAK GVPSISYNLR
KSGAALINRK DGKQAITEIA RLGKLIHDEK ASAMIFPEGT RTASGQMKPF QPGGVATLLK
RAPDALIVPV AINGTGAFNP KGIFPLRSFS KLSFTVLPGI EPAGRKAEEI LNEAQEAIRV
AIAG