Gene Dfer_5682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5682 
Symbol 
ID8229298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6829721 
End bp6830107 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content53% 
IMG OID644933528 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003090036 
Protein GI255039415 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.103189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA ATTTCAAAGA AAACCACCCG GAATGCCGGG AAATGATCCT CCCCGTGCGC 
GACGCGCTGG ACGTGATCAG CGGCAAGTGG AAAATTTCCA TCCTCATCGC CATGAGCCTC
GGCAACAAGC GTTTTATGGA GTTGCAGAAC GCCATTCCGA ACATCACCCC GAGAATGCTG
TCGAAAGAGT TGAAGGAGCT GGAAATGAAC CAGCTGGTCG AGCGGAAGGT CTACGATTCG
TTTCCGCCTG TGATCGAATA CGAACGTACC GCGCATGCCC AGTCGCTGGA ACCGCTCATT
GAAGAGCTGC GCCGCTGGGG CGAGTATCAC CGGCTGGTAA TCACCGGTAC AAATATTGAG
CACCCGGTAA AAGAATTGCA GGATTGA
 
Protein sequence
MKENFKENHP ECREMILPVR DALDVISGKW KISILIAMSL GNKRFMELQN AIPNITPRML 
SKELKELEMN QLVERKVYDS FPPVIEYERT AHAQSLEPLI EELRRWGEYH RLVITGTNIE
HPVKELQD