Gene Dfer_5680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5680 
Symbol 
ID8229296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6827276 
End bp6828376 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID644933527 
Producthypothetical protein 
Protein accessionYP_003090035 
Protein GI255039414 
COG category[R] General function prediction only 
COG ID[COG5322] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0387198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGGGA TTAAGCAGCC GGCAGCAGCA GGGAAGGAGA GTCGGAAATT TGCTTTCCTG 
GTTCATTTAC GAAGCTATCG GGAGGATTTG AAACACATCG CTCGGCCGCT CGGATGGCTT
CCCGATCAAT TCTATCATTA TACTCTGGGC AAACGCCCGC TCCGCCCGTT TCTTTGGAGC
AATGTCGCCA TCGGGGCGGA CGGGGACGAG GCAAGCGGCA GCATCATCAT GGTGCCCTAT
TCGGGGCGGC AGCTGCTTGA ACGGCCGCGG CAGATGCTGC CGATTGTTCA GGACGCGGTC
GATCTCGCTG TTTCCAAAGG GGCAACGATG ATCGGTTTAG GCGGATTGAT ATCGCCCGTA
ACGCTGGGCG GCAAGCTCGT AGCAGGCCGG GCAACTTATG GTGTGACCAA TGGAAATGCT
TTTACAGCCG TCACTATTTT CAGGCGGTTA CAGCGTTTGC TGGATGAGTT CGGCGGTTTC
AGACCGACCA TTGCCGTGGT GGGTGCGACG GGAAGTGTGG GGTCGTTGCT TTGTAAGATG
CTGGCTGCGC AGGAACGCGA TGCGCGCTAT TTGCTGGTTG CAAGAAACGC CCGAAAGCTG
GACAGTTTCT GCCACGAGGT TTCCAGGCAA TACACATCTG TAAGCATGTC GACTTCCGTT
CGCATGGACG ATGTCCGTCA TGCCGATATT GTAGTCCTCG TAACAAGCGA TGCCGGAAGC
TTGCTGAACC CGTCGCACTT ACGTGAAAAT TGCATTGTAC TCGACGCAAC GCAGCCCCGG
AACGCTTCAC GACTGATCAC CACGCTGCGG TCGGACATTC AATTGATTGA TGGAGGCCTG
GTGTCCGTTC CCTCATTACG GACCAACAAA ATCGGCCGGC TGGGATTGCC GTCGGGCATA
TCCTTCGCGT GCATGGCCGA AACGATGCTG CTCTCATTGA GCGGTCACAA TGCCGACTTT
TCGATCGGAA ACCCGGGATT AGAACACGCG GAAGCTATTG GGCAAATGGC GCGAAAGCAT
GATCACCTGG GTTTCAAAAC TGCGGAGGAC CATACTTTTG GCAAACCGCA AATGGTGCGA
CTACCCGAAA TGGTTTGCTA A
 
Protein sequence
MQGIKQPAAA GKESRKFAFL VHLRSYREDL KHIARPLGWL PDQFYHYTLG KRPLRPFLWS 
NVAIGADGDE ASGSIIMVPY SGRQLLERPR QMLPIVQDAV DLAVSKGATM IGLGGLISPV
TLGGKLVAGR ATYGVTNGNA FTAVTIFRRL QRLLDEFGGF RPTIAVVGAT GSVGSLLCKM
LAAQERDARY LLVARNARKL DSFCHEVSRQ YTSVSMSTSV RMDDVRHADI VVLVTSDAGS
LLNPSHLREN CIVLDATQPR NASRLITTLR SDIQLIDGGL VSVPSLRTNK IGRLGLPSGI
SFACMAETML LSLSGHNADF SIGNPGLEHA EAIGQMARKH DHLGFKTAED HTFGKPQMVR
LPEMVC