| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5674 |
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| Symbol | |
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| ID | 8229290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6817467 |
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| End bp | 6820583 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933521 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003090029 |
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| Protein GI | 255039408 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.167608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA GTGTCGTCGC GAGCCCGCTC GCAAGGGTTG ACCAACGTGT CAGAACCGAC
CGTAGCATTA CCGGTACCGT GCTTGCCAGA GAAGGAAATG TGCCCATTCC GGGTGTAACG
GTTGTTGTAA AAGGTACCAC ACAGGGCACC ACCACCAATG CCGAAGGAAA GTACACCATC
GAAATTCCCG GCAACTCGGC CGTGCTGGTG TTTTCGGCCG TGGGTTATGT TACCTGGGAG
CAGGAAACAG GGAATGCGGG CGTGGTGGAC ATTACGCTTG CCACCGACCA GAAAACGCTC
AATGAAGTAG TGGTGGTGGG CTATGGCACG CAAAAGAAAC GCGACCTCAC CGGTGCCGTT
TCCCAGGTGA GCGCCACCCG GCTTGAAAAC GAGAACCCGC AGTCGGTGCA GGATGTGCTG
CGCGGGAATG TGGCCGGTAT GAATGTCGGC TTTTCTACTT CCGCAAAGGG CGGCGGAAGT
GTTTCGGTAC GCGGCCAGAA TTCGATCAAT GCAGGTTCTA CGCCTTTGAT CGTGCTCGAC
GGGACCATTT ACTATGGTGG CCTGGAAGAC ATTAACCCGA ACGATATCGA GACGGTGGAT
GTGCTGAAAG ATGCCAGTTC TTCGGCTGTT TTCGGTGCGA AAGCCGCCAG CGGTGTCATT
CTGATCACCA CCAAAAAGGG GAAAGAAGGT AAGCCGGTGA TCAATGTCAA CACCAACTTC
GGGTTCGCGG AAGTGGCCAG GAACCAGCCG GTGCTGAGTC CGCAGGGCTT TGTTACCTGG
CGACAGGAGG TGATGCGGAA CATCAATGCT ACCGCCGAGC CGGCCCGCTT TGCCGATCCC
AACCACCTTC CGGCGGGTGT CACCCTCGAT CAATGGCTTG CTTTCGACGG TTCAAAGGGA
GATCCTACCA CTGTGTGGCT CCAACGCCTG GGCATGCAGC CGGCGGAAAT CCAGAACTAC
AAGGATGGTA AAAGTGTGGA TTGGTATTCC AAAGTATTTC AAAAAGGCTT CCGCCAGGAC
CATACCGTCA GTCTGTCAGG CCGCAACGAC CGCATTACCT ACTATATGTC GCTGGGCTAC
CTGAGCAACG AGGGTATCGT GGTGGGCGAT AAGTACAGCA CCGTTCGCGC ACGCCTGAAC
ATCGAAGGCA AAGTGAACAA GCATTTGTCG GTAGGGATGA ACACGCAGTT CGCAAGGCGG
GATGAAAGCC AGGTGCCTGT CAATTACGAC CTGGCGCGCG TGCTTTCGCC ATGGGGCTCG
GAATTCGATG CGAATGGCAA CTACTCCTGG CGGCCGAATG GCGAAGCGAG CGGCGGCAAC
CATCCCTATT ATGCGCGAAG TTTCATCAAG CGCGATCAGG GAGCACAAAC GCTCAACTCC
GTAATTTTCG CCAAAGTGAC GCTTCCGTTC GGGTTTACCT ACCAACTCAA TTTCACACCC
CGTTTCGACT ATACACATCG CTACAATGCA GAGTCCGCCA AGCACGCCGA ATGGGCGGCC
GAGGGCGGTC GCGCTTCCCG CAAAGACTCT ACGGTGTTCA ACTGGCAGGT CGATAATGTT
CTGAAATGGA CTAAAACCAT CAACCAGAAA CACAACATCG ACCTCACTTT GCTGGCCAAT
GCGGAACGAT TCAAAAGCTG GCGCGACAGT ATTTCAAACA AGGGATTTGC ACCGACGGAT
GTGCTCGGCT ACCACAACAT TCAGTCCGGC GGCCTTCCGG TAGTGTACAC CGACGACCAG
ACGAGCACCG CCGACGCTTT AATGGCGCGC CTGTTCTATT CATTTAAGGA TAAATACATG
ATCACGCTTT CGAGCCGCCG GGACGGCTAT TCGGCTTTCG GGCAGAAAAA CCCGCGGGCA
GTGTTTTCGT CGGCAGCGTT TGGGTGGGTG TTTACGGACG AAGGTTTTCT GCATTCCAAA
TGGCTGAGTT ACGGAAAACT GCGGATATCG TATGGAAACA ATGGTAACCG CGACATCCCG
CGTTACGACG CCCTCGCCGA CCTGACTTCC GGCAAATACC TGCACGTGAA GCCCGACGGA
ACAGTGTACC AGGTAAGCCA GCTCTATGTA AGCCGCATGG CGAATCCGAA TTTGAAGTGG
GAGAAAACCA ATGCATTGAA CGTCGGCCTG GACTTCGCCT TATTCAACAA CCTGGTCGAT
GGAAGTATCG AAGTCTACAA ATCGACTACC AAAGACCTGC TCGTCAAACG TGCGCTGCCC
AATGTGCTCG GCTTCGATAA TGTGTGGGAT AACCTCGGTG AAGTACAGAA CAAAGGGATG
GAAATCAGCC TGAACTCCAA CAATATGCGC CGGGAGAACT TCACCTGGCG GAGCACATTC
AATTTCCAGC TCAACCGGAA CAAAATCGTT CATTTGTATG GAAATATGGT AGATATCAAA
GACGCCGGCG GCAAGGTAAC GGGCCGCAAG GAGGCCGACG ACGTGACCAA CCGCTGGTTT
ATCGGCCACG CCCTCGACGA AATCTGGAAC TATCGCATCC TGGGCGTGTG GCAAAAAGAA
GAGGAAGCCG AAGCTACCAA GTACGGTGTA AAGCCAGGTG ATTTTAAATT AAAGGATGTG
AATGGCGATG GCAAATTCAC GAATGACGAC AAGGAGTTTC TGGGTTACAC CACGCCACGC
TTCCGGTGGA CGTTCCGCAA CGAATTCAAG CTGTTCAAAA GCCTGGACGT TTCGTTCATG
ATCTATTCAT ACTGGGGACA GAAAGGCACA TTCAACCAGA TGAAAAACCG CGACGGCTTC
GTGGACCGCA CCAGTTCGTA CGTATTCCCG TACTGGACCG CAGAAAACCG CTCGAACGAA
TGGGCCAGGC TCTATTCCAG CGAGGGCTCG GCCACCGGAT ACAGTGTTTA CCGGAGCAAA
TCGTTCGTCC GGTTCGAAAA CCTGTCGGTG GCTTACACGG TGCCCAAAAA TGTTTCTCAA
AAAGTGGCTG TACAAAACCT GCGCGTTTAC GGCAACGTAC GCAATATCGG CTTCTGGGCG
CCGCAATGGA ACTTCTGGGA CCCTGAGAAC GGCACCAACG GCGCCACGAA CGCAAGCATT
GCCACCTCGG TACCGAGCCC GCGCATTTAC ACCATCGGGC TGGATATTAC CCTGTAA
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| Protein sequence | MSASVVASPL ARVDQRVRTD RSITGTVLAR EGNVPIPGVT VVVKGTTQGT TTNAEGKYTI
EIPGNSAVLV FSAVGYVTWE QETGNAGVVD ITLATDQKTL NEVVVVGYGT QKKRDLTGAV
SQVSATRLEN ENPQSVQDVL RGNVAGMNVG FSTSAKGGGS VSVRGQNSIN AGSTPLIVLD
GTIYYGGLED INPNDIETVD VLKDASSSAV FGAKAASGVI LITTKKGKEG KPVINVNTNF
GFAEVARNQP VLSPQGFVTW RQEVMRNINA TAEPARFADP NHLPAGVTLD QWLAFDGSKG
DPTTVWLQRL GMQPAEIQNY KDGKSVDWYS KVFQKGFRQD HTVSLSGRND RITYYMSLGY
LSNEGIVVGD KYSTVRARLN IEGKVNKHLS VGMNTQFARR DESQVPVNYD LARVLSPWGS
EFDANGNYSW RPNGEASGGN HPYYARSFIK RDQGAQTLNS VIFAKVTLPF GFTYQLNFTP
RFDYTHRYNA ESAKHAEWAA EGGRASRKDS TVFNWQVDNV LKWTKTINQK HNIDLTLLAN
AERFKSWRDS ISNKGFAPTD VLGYHNIQSG GLPVVYTDDQ TSTADALMAR LFYSFKDKYM
ITLSSRRDGY SAFGQKNPRA VFSSAAFGWV FTDEGFLHSK WLSYGKLRIS YGNNGNRDIP
RYDALADLTS GKYLHVKPDG TVYQVSQLYV SRMANPNLKW EKTNALNVGL DFALFNNLVD
GSIEVYKSTT KDLLVKRALP NVLGFDNVWD NLGEVQNKGM EISLNSNNMR RENFTWRSTF
NFQLNRNKIV HLYGNMVDIK DAGGKVTGRK EADDVTNRWF IGHALDEIWN YRILGVWQKE
EEAEATKYGV KPGDFKLKDV NGDGKFTNDD KEFLGYTTPR FRWTFRNEFK LFKSLDVSFM
IYSYWGQKGT FNQMKNRDGF VDRTSSYVFP YWTAENRSNE WARLYSSEGS ATGYSVYRSK
SFVRFENLSV AYTVPKNVSQ KVAVQNLRVY GNVRNIGFWA PQWNFWDPEN GTNGATNASI
ATSVPSPRIY TIGLDITL
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