| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5669 |
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| Symbol | |
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| ID | 8229285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6808259 |
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| End bp | 6810628 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644933516 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003090024 |
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| Protein GI | 255039403 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA TTCTTTCAAT TGCACTAATA TGCATTTCGC TCCAAGCGTT CGCTCAACGT
ATAACCATAA GCGGGTTTGT TAAAGAAGCT ACCAGCCAGG AGCAATTGCC GGGCGCTAAT
GTCTACATCG AGGGGACTTC GTTCGGGACA GCAACCAATT CCTACGGATT TTATTCCCTC
ACCGTCCCGC TCGCCGATTC GGCGGTGCTT GTATTCTCAT GCATCGGTTA CCGGCGTCAC
GAACATAAAA TCAGTCTTAG AGAAAATAAG CAGCTTAATG TCTGGCTAAT CCCCGATAAC
CAGCTTGATG AAGTAGTCAT AAAAACGCAG CGCGACGATC CGGTGAGCGA TGTGCAAATG
AGCCAAATCA ACGTCTCCGT TCAGCAGATC AAGAAAATAC CCGCATTTTT TGGTGAAAAA
GATGTGTTGA AAGTACTACA ACTCATGCCT GGGGTGCAGA AAGGAACGGA GGGTCAAACC
GGCTTGTATG TACGTGGCGG CGGACCTGAT CAAAACCTCA TCATTCTGGA CGATGCCCTG
GTTTACAATG CCAATCACCT GTTCGGTTTC TTTTCGGTTT TCAATAGTGA CGCGATCAAG
AGTGTGGAGC TTACCAAGGG CGGATTCCCG GCACGCTACG GCGGGCGGCT TTCATCGGTC
GTCGACATGA ATATGAAAGA AGGCAGCAAG GACCGGCTTC ATGGCGAGGG CGGCATTGGC
TTGCTATCGT CGCGCCTGAC GCTGGAAGGA CCGATCAGGA AGGAAAAGTC GTCGTTTCTG
CTGTCAGCCA GAAGAACGTA TCTCGATGTA CTGGCGGCGC CAATCATTGC CAACGCGCAA
AAAGGCCAGG ATGAACGCTC TAAGCCAGGT TACTACTTTT ACGATCTCAA TGCAAAAGTA
AATTTTGATA TCAGCCAAAA GGATAAGCTA TACCTGAGCA GCTACTTCGG CCGGGATAAG
TTTTATATGC GCGATAAGAG TCGGTTCTAC CGGTCGAATG TAAATTTGTA CTGGGGTAAT
GCGACCGCTA CGCTGCGCTG GAACCACCTT TTTACACAAA AATTATTTGC CAACTCTTCA
CTGATATTCA GCAATTTTAA CTTCGGCGTC GTCAGCGAAT TTACCAACTT AGACGATAAA
GGTGCTGAAA TCGGATTTAG CAGCTCCTGT TATCAATCCA GTATCAGGGA TGTTAGTCTG
AAAACAGATT TTGACTATTA TCCCCACCCA CAACACAGTG TGAGGTTCGG CATTCAGGCT
GTTTTCCACA AATCGACGCC TTCCGCACTT GACATTACCG GGGCGGACAT TAATCCCGAG
GTCAACAAGC CAGCCCAGAA CTTATATTCT ACTGAGTCGG GAGCGTATCT GGAAGATACC
TGGCAACTGT CAGATGCATT CAAGCTGAAC ATGGGTATCA GGCTAAGCAC ATTTGTAACG
CAAGGCAAGA CATACGTCCG CCCGGAGCCC AGAGCGTCAG CGGCACTCCG GCTGGCAAAG
AATCTCTCGA TGAAATTATC CTATGCGATG ATGAACCAGT ATGTCCATTT GTTGTCGAAC
ACCGGCGTTG GTCTGCCCAC CGATTTGTGG GTACCTGCTA CCAAGAAGAT CGTGCCGCAG
CACTCGGAAC AATTTGCCGG CGGTTTTGCC GGCTATCTCG AACGGCCGGC ATTGACAGTA
ACGATGGAAG GCTATTACAA GAAAATGGAC CATATACTTT CCTACAAAGA GGGGGCCTCG
TTTGTAAATA TTGATGGGGA AGATTTTAAT GAGGTAAGCT GGCAGGACAA TGTTACGGCC
GGACGCGGCT GGTCTTATGG AGCCGAGTTA CTCGTTCAGA AGAAATCGGG GAAGCTGTCG
GGCTGGGCAG GGTACACATT ATCGTGGACG CGTTGGAATT TTCCGCAAAT CAATTTCGGA
CGCACATTTT TTCCCAGGCA TGATCGTCGC CACGACATTT GCATTGTAGG AATATATGAA
ATTAACAAGC GGATCACCCT GTCCGGCACC TGGGTATACG GCACAGGTAA TGCACTCACT
TTGCCCGTTT CGACCTACAA CGCTGTGACG GAGCGGTTCT CGGGTGCGAG CATTTCCAAC
GACGCACATT TGCTCAGCAC CTCGATGACC GAATATTCCG GAAGAGGCAA TTTCCGCGCC
GAGCCGTTTC ACCGGATGGA CCTGGCCATT CAGTTTCACA AGCGGAAAAA GCGATACGAT
CGGACCTGGG AATTTGCGAT CTACAATGTT TACAGCAGAA AGAACCCGTT TTTTTACGAC
ATCGACACCG ACCAGGCCAA TCATCGCGAG ATGAAAAAAT ATTCGCTCTT CCCTATTCTG
CCGTCTCTTA GCTACAACTT CAAATTCTAA
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| Protein sequence | MKHILSIALI CISLQAFAQR ITISGFVKEA TSQEQLPGAN VYIEGTSFGT ATNSYGFYSL
TVPLADSAVL VFSCIGYRRH EHKISLRENK QLNVWLIPDN QLDEVVIKTQ RDDPVSDVQM
SQINVSVQQI KKIPAFFGEK DVLKVLQLMP GVQKGTEGQT GLYVRGGGPD QNLIILDDAL
VYNANHLFGF FSVFNSDAIK SVELTKGGFP ARYGGRLSSV VDMNMKEGSK DRLHGEGGIG
LLSSRLTLEG PIRKEKSSFL LSARRTYLDV LAAPIIANAQ KGQDERSKPG YYFYDLNAKV
NFDISQKDKL YLSSYFGRDK FYMRDKSRFY RSNVNLYWGN ATATLRWNHL FTQKLFANSS
LIFSNFNFGV VSEFTNLDDK GAEIGFSSSC YQSSIRDVSL KTDFDYYPHP QHSVRFGIQA
VFHKSTPSAL DITGADINPE VNKPAQNLYS TESGAYLEDT WQLSDAFKLN MGIRLSTFVT
QGKTYVRPEP RASAALRLAK NLSMKLSYAM MNQYVHLLSN TGVGLPTDLW VPATKKIVPQ
HSEQFAGGFA GYLERPALTV TMEGYYKKMD HILSYKEGAS FVNIDGEDFN EVSWQDNVTA
GRGWSYGAEL LVQKKSGKLS GWAGYTLSWT RWNFPQINFG RTFFPRHDRR HDICIVGIYE
INKRITLSGT WVYGTGNALT LPVSTYNAVT ERFSGASISN DAHLLSTSMT EYSGRGNFRA
EPFHRMDLAI QFHKRKKRYD RTWEFAIYNV YSRKNPFFYD IDTDQANHRE MKKYSLFPIL
PSLSYNFKF
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