Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5639 |
Symbol | |
ID | 8229255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6776712 |
End bp | 6777458 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644933486 |
Product | ABC transporter related |
Protein accession | YP_003089994 |
Protein GI | 255039373 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.307001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCAGG ACGACAAAGT GATTGTTTGC GAGAAGCTCA CCAAGCGCTT CGGCGACTTT ATCGCCACCA ATGAAATCAC ATTCGAAGTA CATAAAGGGG AGATTTTTGG CTTCCTCGGC GCGAACGGGG CCGGCAAAAC CACCGCCATG CGAATGCTAT GCGGGCTATC TTCGCCCAGC TCGGGGCAGG CGACCATTGC GGGGTACGAT GTGTACACGC AAACCGAGCA GATCAAGAAA AATATCGGCT ACATGAGCCA GAAGTTTTCA CTCTACGAAA ACCTGACCGT GCGGGAAAAC ATCGAGTTTT TCGGCGGCAT TTACGGACTT TCCGACAAAC GCATTCAAAC TAAAACCGAA GAACTGCTCG AACGGCTCGG ATTAAAAAGC GAGGCAAACA AACTGGTGGC CTCGCTGCCG CTCGGCTGGA AACAGAAGCT CTCTTTTTCG GTGGCGGTGC TGCACGAGCC GAAAATCGTG TTCCTCGATG AGCCCACCGG CGGCGTGGAC CCGGTGACGC GGCGGCAGTT CTGGGACATG ATCTACGAGG CAGCCAATAG CGGCATTACC GTTTTCGTGA CTACACATTA TATGGATGAG GCCGAGTATT GCAACCGTAT ATCCATTATG GTGGATGGTA AAATGGAAGT GCTCGATACG CCGGCGAACC TGAAAAACAG CTTTCACGCG CGCTCGATGG ACGAAGTGTT TTACCAACTC GCCCGCGGCG CCAAAAGAGG GGATTAG
|
Protein sequence | MMQDDKVIVC EKLTKRFGDF IATNEITFEV HKGEIFGFLG ANGAGKTTAM RMLCGLSSPS SGQATIAGYD VYTQTEQIKK NIGYMSQKFS LYENLTVREN IEFFGGIYGL SDKRIQTKTE ELLERLGLKS EANKLVASLP LGWKQKLSFS VAVLHEPKIV FLDEPTGGVD PVTRRQFWDM IYEAANSGIT VFVTTHYMDE AEYCNRISIM VDGKMEVLDT PANLKNSFHA RSMDEVFYQL ARGAKRGD
|
| |