Gene Dfer_5639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5639 
Symbol 
ID8229255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6776712 
End bp6777458 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID644933486 
ProductABC transporter related 
Protein accessionYP_003089994 
Protein GI255039373 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.307001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGG ACGACAAAGT GATTGTTTGC GAGAAGCTCA CCAAGCGCTT CGGCGACTTT 
ATCGCCACCA ATGAAATCAC ATTCGAAGTA CATAAAGGGG AGATTTTTGG CTTCCTCGGC
GCGAACGGGG CCGGCAAAAC CACCGCCATG CGAATGCTAT GCGGGCTATC TTCGCCCAGC
TCGGGGCAGG CGACCATTGC GGGGTACGAT GTGTACACGC AAACCGAGCA GATCAAGAAA
AATATCGGCT ACATGAGCCA GAAGTTTTCA CTCTACGAAA ACCTGACCGT GCGGGAAAAC
ATCGAGTTTT TCGGCGGCAT TTACGGACTT TCCGACAAAC GCATTCAAAC TAAAACCGAA
GAACTGCTCG AACGGCTCGG ATTAAAAAGC GAGGCAAACA AACTGGTGGC CTCGCTGCCG
CTCGGCTGGA AACAGAAGCT CTCTTTTTCG GTGGCGGTGC TGCACGAGCC GAAAATCGTG
TTCCTCGATG AGCCCACCGG CGGCGTGGAC CCGGTGACGC GGCGGCAGTT CTGGGACATG
ATCTACGAGG CAGCCAATAG CGGCATTACC GTTTTCGTGA CTACACATTA TATGGATGAG
GCCGAGTATT GCAACCGTAT ATCCATTATG GTGGATGGTA AAATGGAAGT GCTCGATACG
CCGGCGAACC TGAAAAACAG CTTTCACGCG CGCTCGATGG ACGAAGTGTT TTACCAACTC
GCCCGCGGCG CCAAAAGAGG GGATTAG
 
Protein sequence
MMQDDKVIVC EKLTKRFGDF IATNEITFEV HKGEIFGFLG ANGAGKTTAM RMLCGLSSPS 
SGQATIAGYD VYTQTEQIKK NIGYMSQKFS LYENLTVREN IEFFGGIYGL SDKRIQTKTE
ELLERLGLKS EANKLVASLP LGWKQKLSFS VAVLHEPKIV FLDEPTGGVD PVTRRQFWDM
IYEAANSGIT VFVTTHYMDE AEYCNRISIM VDGKMEVLDT PANLKNSFHA RSMDEVFYQL
ARGAKRGD