Gene Dfer_5637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5637 
Symbol 
ID8229253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6774858 
End bp6775793 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content55% 
IMG OID644933484 
Producthypothetical protein 
Protein accessionYP_003089992 
Protein GI255039371 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.468435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT ATCCTTATCT GCTCATATTG GCTGCCGCCG CGGCCGCCTG TAATGGAAAA 
GAGAACCCTT ACGACGCTTC GGGCACGTTT GAAGCCGTGG AAACGATCGT GTCGGCAGAG
GCGACGGGGC GCATTATGGC GCTTAGCCTG GAAGAAGGAC AGGCATTGAA GGCCGGCGAA
ACGGTGGGTT ACATTGATAG CCTGCAATTG TATTTACGCA AAAAGCAGCT CGAAGCGCAA
ATCAGGGCGA CCGGCAGCCG TCTGCCCGAC ATTGTAGCGC AAACCAATGT GTACAAGCAG
CAAATCGCCG TTTCGCAGGT GCGCCTGGAC AATCTCCTGC ACGAGCAAAA ACGCATTCAA
AACCTGGTGA AAGCCGACGC CGCCACGCCC AAGCAGCTGG ACGACGTGAA TGCACAAGTG
GAAGAGTTGC AAAAGCAGCT GGAAGTTATC CGCAAACAGG ATGCCGCGCA AACGTCTGTT
TTGAAAACGC AAACCTCCGG CCTGCGCGCC GACGTGCAGC CATTGGTGGT TCAGATCGAG
CAGATCAACG ACCAACTGGC GAAGTCCAGG ATCGTTAACG AAGTGAATGG GACGGTGCTC
ACCAAATATG CCGAGGCCAA TGAAGTAGCG GCGGCAGGGA AGCCTTTGTA CAAAATCGCC
GACCTCTCGA CGATTATCCT GCGGGCCTAT GTAACCGGCG ACCAGCTGAC GGGCATTCAG
CTCAATCAGC AGGTGAAAGT GCTGGTAGAT AGCGCCGGTG GCCATTACCG CGAGCTGCCG
GGCACCATCG AGTGGATCAG CAGCAAGGCA GAATTCACCC CGAAAACCAT CCAGACGAAA
GACGAGCGCG CCAACCTGGT GTACGCGGTG AAAATCCGCG TGAAAAATGA CGGTTACCTG
AAAATAGGCA TGTACGGAGA AGTAGCATTG AAATAA
 
Protein sequence
MKAYPYLLIL AAAAAACNGK ENPYDASGTF EAVETIVSAE ATGRIMALSL EEGQALKAGE 
TVGYIDSLQL YLRKKQLEAQ IRATGSRLPD IVAQTNVYKQ QIAVSQVRLD NLLHEQKRIQ
NLVKADAATP KQLDDVNAQV EELQKQLEVI RKQDAAQTSV LKTQTSGLRA DVQPLVVQIE
QINDQLAKSR IVNEVNGTVL TKYAEANEVA AAGKPLYKIA DLSTIILRAY VTGDQLTGIQ
LNQQVKVLVD SAGGHYRELP GTIEWISSKA EFTPKTIQTK DERANLVYAV KIRVKNDGYL
KIGMYGEVAL K