Gene Dfer_5630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5630 
Symbol 
ID8229246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6766794 
End bp6767525 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID644933477 
ProductMethyltransferase type 11 
Protein accessionYP_003089985 
Protein GI255039364 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.502531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.666703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTG TCGTTTCCAC CATCAAGTTT CACAACAACC AGCAACTCGA TTATTTCGGG 
CATAAGATCA AGCAAACCAT GATCCCTGTT TCGTCCCCGT ACGTGCGCAG GCATGTGAAG
GAAGTGATCG ATTTCGCCGG GATCAAAAAG TCGGACCGGA TCATCGACGT GGCTTGCGGG
ATGGGTAAAT ACACACTCAG CTTTCTGGCG CAGGGCTACA AGGTGGAAGG CCTCGATCTT
TCGCCGTTTC TCTTGCAGCA GTTGCTGGTG TACAACGATA ATAAATTTCC GGTAAAACTG
CACGCTGCCG ACATTCTGGA CGCGCCCGAG GAGCTGAACG AGCAGTTCGA TGTGGTAATG
GGTTTTATGG CTTTGCACCA TTTTCACAGC CTGCATGCAT GCTTCCAGGC CATGCACCGG
ATCGCAAGGC CGGGTGCCAA GCTGGTATTC CTCGAACCAA ATGCATACAA CCCCCTCTAT
TATCTGCAAA TCGCATTTAC ACCGGGCATG TCGTGGGAAG GCGACAAAGG TGTGGCGGAC
ATGACCAAAA AGAAACTGTT CGACGCTATG GCTTACGCCG GTTGGAGCAA TCCGAAGATC
AAACGCTTCG GGTTTTACCC GCCGTTCCTG GCCAACAGCG GGTTTGGGCA AAAAAGCGAG
CCGGTGCTGG AAAAAATTCC GGGGCTGAAC AGCTTTTTGC CATTTCAGAT TATCACGGCA
GAAAAACGAT AA
 
Protein sequence
MSIVVSTIKF HNNQQLDYFG HKIKQTMIPV SSPYVRRHVK EVIDFAGIKK SDRIIDVACG 
MGKYTLSFLA QGYKVEGLDL SPFLLQQLLV YNDNKFPVKL HAADILDAPE ELNEQFDVVM
GFMALHHFHS LHACFQAMHR IARPGAKLVF LEPNAYNPLY YLQIAFTPGM SWEGDKGVAD
MTKKKLFDAM AYAGWSNPKI KRFGFYPPFL ANSGFGQKSE PVLEKIPGLN SFLPFQIITA
EKR