| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5625 |
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| Symbol | |
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| ID | 8229241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6761575 |
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| End bp | 6763269 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933472 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_003089980 |
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| Protein GI | 255039359 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.565208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAG TAATTCGTAT GCCCAAAATG AGCGACACCA TGGAAGAAGG TGTTATCGCG
GAATGGCACA AAAAAGTAGG CGATAAAATT AAATCCGGTG AAGTGATTGC TGAGGTGGAA
ACCGACAAGG CGACTATGGA CCTGGAATCT TACTGGGACG GTACCCTTCT TTACATCGGC
GTGAAAAAAG GCGATGCAGT ACCTATCGAC GGTATCATGG CGATCGTAGG CAACGAAGGC
GAAGACTACC AGTCGCTGCT CGACGGTGCC AGCAATGGCA ACGGCGCTGC TACCGCACCT
GCCAAAGAAG AGTCGGCACC CGCTCCTAAG GAAGAAGCTC CCGCTGTGGA AACCATTGAC
GCACAAAGCG CGCCGGCAGC GAAACCTGCA CCCGCTCCTG CATCTACCGA GAAAATTAAT
GCTGCGGTAG TGCGTATGCC GAAAATGAGC GATACCATGG AAGAAGGTAC GCTGGTTTCA
TGGCAGAAAA AAGTAGGTGA TAAAGTAAAA TCAGGCGATA TCCTGGCCGA AGTCGAAACC
GACAAGGCTA CGATGGAGCT CGAAGCATAC GAGGACGGCA CATTGCTTTT CGTAGGCATT
AAAGAAGGCG AAGCAGTTCC TGTGGACGCG ATCATCGCCG TAATCGGTGA AGAAGGTGCG
AATGTAGAAG CATTGCTGGC CCGCGAAAAC GGCGAAGCGC CTGCGGAAGC GGAAGCAGCT
CCGGCACAAG CAGCCACTTC GGCACCGACT GTAAATGGCT CCGATAAAGC CGTTTCAGTA
GCTGACTCCG GTGACCGTGT GAAAGCATCG CCCCTGGCGA AACGCCTGGC CGACGAAAAA
GGCATTAACC TGAGCGAAGT GTCAGGAAGC GGCGACAACG GACGCATCGT AAAACGCGAT
GTTGACGAAT TTAAGCCTGC CGCACAGGCA TCGGCTCCTG CTGCTGCCCC CGCACAAACT
GCTCCGGCTG CCAAAGCCGA GGCTGCTCCC GCTGCGGCTG CCCCTGCATC AGGCGACTTT
ACCGATACGC CAATCTCGCA AATGCGTAAA ACCATTGCAC GCCGCCTGAG CGAAAGCTTG
TTCACTGCGC CTCACTTCTA CGTGACCATG GAAATCAACA TGGACAAGGC AATGGCACTC
CGCCCGCAGC TGAACGAAGT GGCTACCGCG AAGATCTCAT TCAACGACAT GGTGATCAAA
GCATGCGCCG TGGCATTGAA AAAACATCCT GCCGTAAACT CCGCGTGGCT GGGTGACAAA
ATCCGGAAAT ACAATTATGT CAACATCGGT GTAGCCGTGG CAGTGGACGA AGGTTTGCTC
GTGCCGGTAA TCCGCGAGGC TGACAAGAAA ACGCTTTCTG CCATTTCAGG CGAAGTAAAA
GACCTGGCCG GCAAAGCGAA AGATAAAAAA CTGCAACCGA AAGACTGGGA AGGCAACACA
TTCTCGGTGT CGAACCTCGG AATGTTCGGT GTAGACGAAT TTACAGCGAT CATCAACCCG
CCGGATTCCT GTATCCTGGC GATCGGTGCG ATCAAGAAAG TGGCTGCTTT CAAGGAAGAT
GGAACGGTTT ACCCGACCAA CATCATGAAA GTGACGCTTT CCGCCGACCA CCGCGTGGTA
GATGGCGCAA CTGCTGCCCA GTTCCTTTTG ACAGTGAAAA AACTGTTGGA AGAGCCAATG
AGCATGCTGG TTTAA
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| Protein sequence | MAEVIRMPKM SDTMEEGVIA EWHKKVGDKI KSGEVIAEVE TDKATMDLES YWDGTLLYIG
VKKGDAVPID GIMAIVGNEG EDYQSLLDGA SNGNGAATAP AKEESAPAPK EEAPAVETID
AQSAPAAKPA PAPASTEKIN AAVVRMPKMS DTMEEGTLVS WQKKVGDKVK SGDILAEVET
DKATMELEAY EDGTLLFVGI KEGEAVPVDA IIAVIGEEGA NVEALLAREN GEAPAEAEAA
PAQAATSAPT VNGSDKAVSV ADSGDRVKAS PLAKRLADEK GINLSEVSGS GDNGRIVKRD
VDEFKPAAQA SAPAAAPAQT APAAKAEAAP AAAAPASGDF TDTPISQMRK TIARRLSESL
FTAPHFYVTM EINMDKAMAL RPQLNEVATA KISFNDMVIK ACAVALKKHP AVNSAWLGDK
IRKYNYVNIG VAVAVDEGLL VPVIREADKK TLSAISGEVK DLAGKAKDKK LQPKDWEGNT
FSVSNLGMFG VDEFTAIINP PDSCILAIGA IKKVAAFKED GTVYPTNIMK VTLSADHRVV
DGATAAQFLL TVKKLLEEPM SMLV
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