| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5621 |
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| Symbol | |
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| ID | 8229237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6758687 |
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| End bp | 6760165 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933468 |
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| Product | D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- al anine-endopeptidase |
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| Protein accession | YP_003089976 |
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| Protein GI | 255039355 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAA CGACCCTTCT ATTGTTTTGC ATTTTCTTAG GAATTCGCGC AGCACAGGCG
CAGGTGATCG ACAGCGCCGG TCTGGTCCGT TTTTCCGACG CCGTCCTCGA ATTACAAAAC
AGCGAATTCA TGCGAAGCGG CTCACTGGCG GTGAGTATTA AGGCCGTAAA GGAGAATAAG
AATGTATTTT CACTCAACCA CGAGCGTTCG CTTCCCTCGG CGTCCACCCT GAAACTCGTT
TCCACAGCCA CCGTCCTTGC GCTGTTTGGC GGTGATTTCA AATTCCAAAC ATTCCTCGAA
CACGACGGCA TCATTCGCGG CGACACGCTC GCGGGTAACC TCTACATTCA CGGAACCGGC
GATCCATCCC TGGGCAGCGA CCGGTTCAAA GGCTATCCGA CGGCCCAGGA AATCATCACC
CGCTGGGTGG CCGCCGTGAA GCGCGCGGGA ATCAGGTATA TTAAAGGCAA AGTGCTTGCC
GACGCATCGT TTTTCGATAA AGAGGCCGTG GCCAGCACGT GGATCTGGGG CGATATGGGC
AACTATTACG GCGCAGGCGT ACAGGGACTG AATTTTAATG AGAATCTCTA TCGCGTAAAG
TTCAAGCCGG GCGGGGATGT CGGCGACCCC ACAAGCGTAC TCGGTACCGA TCCGGCGATT
CCCTATCTAT CATTCACCAA CCAGGTAACC ACCGGCGAGC GCGGTTCGGG CGATAAAACG
GTCATTTACA GTAGTCCGCT GGGCAATAAT GTGGTGCTGA CGGGCACAGT ACCGGCGGGA
AATGCGACTT TCACCGTCAA AGGCTCCATC CCCGACCCGG CGTGGTATGC GGCATATGCA
TTGAAAAACG CCTTGTCGGG CAATGGAGTA GTAGTAGCGG AAGCCGCGCA GCCATCGGGC
AATGCGGCAA GCACTACTCA GAATCCGAAA AGAATAATAG ACGAATACAA ATCCCCGCCA
TTACGCGAAT TATGCCAGCA GACCAACTTT TGGAGCATAA ACCTGTTTGC GGATGCCTTT
TTCAAACAAT CGGGCAAGCG GCTTTCGGGC AGTTCGGGGT TCGACGATGC GGCCACGGCC
ATTACGGGCT ATTGGTCGGG CAGGGGAGCG GATCTGAGGG GTTTTTATAT CAAAGACGGC
AGCGGCCTGT CACCCTCCGG CTCGATCACA GCAAGCAGCC TGACAGACAT TCTGAACCTG
GCAAACAAGG ATGTCAGTTT CAAAGATTTT TACCAAAGCA TCGCCATTCT CGGGCAAAAC
GGAACGGTGC GAAACCTTGG AAAAGGCTCG CGTGCCGCAG GTAACATGCA CGCAAAGAGC
GGTTCCATTG AAGGCACGCG GGCATTTGCG GGGTATGTGA ATGCGAAATC GGGCGCCTTG
CTGAGTTTTA CGATTATCGC GCACAAATAC GTGCCGGGGA GTAACCGCGT GATTTCCGAT
TCGCTGGTGA AGCTGATGAC GCTGATGGCG GAGTTGTGA
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| Protein sequence | MMRTTLLLFC IFLGIRAAQA QVIDSAGLVR FSDAVLELQN SEFMRSGSLA VSIKAVKENK
NVFSLNHERS LPSASTLKLV STATVLALFG GDFKFQTFLE HDGIIRGDTL AGNLYIHGTG
DPSLGSDRFK GYPTAQEIIT RWVAAVKRAG IRYIKGKVLA DASFFDKEAV ASTWIWGDMG
NYYGAGVQGL NFNENLYRVK FKPGGDVGDP TSVLGTDPAI PYLSFTNQVT TGERGSGDKT
VIYSSPLGNN VVLTGTVPAG NATFTVKGSI PDPAWYAAYA LKNALSGNGV VVAEAAQPSG
NAASTTQNPK RIIDEYKSPP LRELCQQTNF WSINLFADAF FKQSGKRLSG SSGFDDAATA
ITGYWSGRGA DLRGFYIKDG SGLSPSGSIT ASSLTDILNL ANKDVSFKDF YQSIAILGQN
GTVRNLGKGS RAAGNMHAKS GSIEGTRAFA GYVNAKSGAL LSFTIIAHKY VPGSNRVISD
SLVKLMTLMA EL
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