Gene Dfer_5614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5614 
Symbol 
ID8229230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6750515 
End bp6751888 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content55% 
IMG OID644933461 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003089969 
Protein GI255039348 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTAA TCGTAGACGA CGACCTTGCC ATTCGCACTT CTCTTGTGCT TCTTTTGAAG 
AAGGAGGGAT TTGATGTGCG GGGGGCTGGG TCGCCGGAGG AAACTTTTGA AATATTGCAG
GCCGTGACGC CCGAGCTGAT TTTGCTCGAC CTTAATTTTT CGATAGAGAC GTCGGGGAAG
GAGGGGATGC ATCTTTTGCA ACGCATTAAG AGGCACAATG CCGCCATTCC TGTGATTTTG
ATCACTGGCT GGGGGACCAT CGACCTCGCC GTGCGCGGGA TGAAGGAAGG GGCCGCGGAT
TTTGTAACAA AACCCTGGCA GAACGATTAC CTGATCCAAT CCATTCGCAC GACGCTGAAC
CTGGCTAAAC CCGTGCCGCA AGCAGGGAGC CGCCGCAAGC TGGACCAGCA ATATCATTTT
GAAAATATCG TCGGCGAGGA CGCCAAATTG CTCGATATCC TTGAAACCAT CGGCCGGGTG
GCTTCTACCG ACGCGCCGGT GCTGATTACG GGCGAGAGCG GCACGGGGAA GGAGCTGATC
GCCGAAGCGA TCCATTCCAA CAGCCGCCGG AAGCTGCGGC CGTTTGTGAA GGTGAACCTG
GGTGGTATTT CGTCGACATT GTTTGAAAGC GAGCTGTTCG GGCATGTGCG CGGCGCATTT
ACGGATGCGA AGAGCGATCG AACGGGCCGG TTCGAGATGG CGCACCGGGG CACGATCTTT
CTGGATGAGA TCGGCGAGCT CGATTTGTCG AGTCAGGTGA AGCTGCTGCG GGTGTTGCAG
GAGCGCACTT TCGAGCCGCT GGGAAGCAGC AAAAGCCGTA CGGTGGACGT GCGGGTAATT
TGCGCCACCA ACCGCAACCT GGAAGAAATG GTGGCCCAGG GCACGTTCCG CGAGGATTTA
TATTACCGCA TTAACCTCAT TACCGTGAAG TTGCCGGCAT TGCGTGAGCG ACCGGATGAC
ATTCCGCTTT TATCGGCGTT TTTTGCGGAT AATCTCAAAA CCATTTATAA CCGTCCCGAT
CTGACAATCA GTAAGGCCGC TTTGAAATGG CTCAAAACAC TTCCGCTGCA AGGCAACATC
CGCCAGCTCA AAAACCTGGT GGAACGAACG GTGCTGCTCG CGACAAACAA CGTGCTTGAT
ATCGACGATT TCCAGCGCAA CCTGAATGCA GGCACCGCTA CCGCGCCGCA TAAGGCCGTT
CCCGAAGTAG GCAGCATTAC GCTCGAAGAA ATGGAGTTTC AGATGATCGT GCGGGCCATG
CAGTACCATC AGAACAAGGT GAGTAAAGTG GCACGGTCGC TCGGGATCAC AAGGTTTGCA
TTGTACCGGC GACTGGAAAA ATTCGGGATA TCCTTTGATT CGGAGGAAGC ATGA
 
Protein sequence
MLLIVDDDLA IRTSLVLLLK KEGFDVRGAG SPEETFEILQ AVTPELILLD LNFSIETSGK 
EGMHLLQRIK RHNAAIPVIL ITGWGTIDLA VRGMKEGAAD FVTKPWQNDY LIQSIRTTLN
LAKPVPQAGS RRKLDQQYHF ENIVGEDAKL LDILETIGRV ASTDAPVLIT GESGTGKELI
AEAIHSNSRR KLRPFVKVNL GGISSTLFES ELFGHVRGAF TDAKSDRTGR FEMAHRGTIF
LDEIGELDLS SQVKLLRVLQ ERTFEPLGSS KSRTVDVRVI CATNRNLEEM VAQGTFREDL
YYRINLITVK LPALRERPDD IPLLSAFFAD NLKTIYNRPD LTISKAALKW LKTLPLQGNI
RQLKNLVERT VLLATNNVLD IDDFQRNLNA GTATAPHKAV PEVGSITLEE MEFQMIVRAM
QYHQNKVSKV ARSLGITRFA LYRRLEKFGI SFDSEEA