| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5610 |
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| Symbol | |
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| ID | 8229226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6745362 |
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| End bp | 6746810 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933457 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003089965 |
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| Protein GI | 255039344 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGA GAAAGCTTTT TATCTGGATT TTGGTGATAT GGTCGGGGGC CGTTTTGGCC
CAAACCCGCA AACTGACGCT CGAAGAAGTG GTGCAGCAGG CCCGGGAGCA GTCCATCGCC
TCCAAGCAGG CTGTTACGCA AAAAAAGACC AACTACTGGC AGTACCGCTC GTTTCTGGCC
GATTACAAAC CGCAACTGAG CCTGCTCGGG ACGGTTCCCG GCTTTACGCG GTCCTACATC
GAAGTGGTGC AGCCGGATGG TACCGTTTCG TTCCAGCCGG TGTCGAATAA CAATTCGATG
CTCAACCTTT CGCTCAGTCA GAGCATTGCC ATGACGGGCG GCACGGTGTA CGTACAGCAG
CAAATGCAGC GTTTTGACGA TTTTCAGCGG GATGTGACGC GCTATAACGG CATTCCGTTT
GAAATAGGCA TCCAGCAGCC GCTGTTCCGG TTTAACCCCC TCAAATGGGA CCGGAAAATC
CAGCCATTGA AATACCAGGA AGGCAACCAG CAGTATATTC AGGCGCTGGA ACAGGTGGCG
CTCGATGCGA CAGGCTTCTA TTTCGAATTG CTGGTGGCGC AGGTGAATTT GCAGATCGCC
GAAAAGAACC GCAGCAACAA TGATACCCTG TTCAAAATCG CACGACATAA GCTGGAATTG
GGCAAGATTT CTCAAAACGA CCTTTTGCAG CTGCAAATGG GGCTTCTGAC TGCGCAAAAG
GATTTGGCAT CGGCCCAGCA AAGTGCGGCG GTAGCTTCGT TGAAGCTGAA AATGTACATG
GGCTCGCGCG ATGAGCGGGC GCTGGAACTG GGCATTCCTT CCGAAGCCGG CGAGTTTGCC
ATTGATCCGC AAATGGCCCT CGACGAGGCG TTTGCGAACC GGTCGGCGTC GGTGGCGTTC
CGCAGGCGGC TGCTCGAAGC GGAGCGCGAT GTGCAGCTGG CGCGTAAGGA CAATGGCCTG
AATGCCACCC TGAATGCGAC ATTCGGCCTT TCCAACCAGG GTAACCTCCC GCGCGACGTG
TACAGAAGCC CGCAGGACCG CGAGTTTGTG GAGCTGCAAT TGACATTACC GATCCTGACC
TGGGGCCGCA ATAAGGCAAG AACCGAGGTG GCGCGCGCCG CTCAGGAATT TGCACAGCAG
TCGGTGGAGC AGGATAAGCT TACTTTTGAA CAGGAAATTT TCACCCAGGT AACCCTTTTA
CAGATGTTGC AAAAGCAAGT CAAACTTACG GAAGTGGCAG ACGGCATCGC CGCCGACCGT
TACCAGATCG CCAAGGAACG CTTCATCCTC AGCGACCTGA GCGTGACGGA CCTCGGCATC
GCCACCCAGG AAAAGGACAT CGCCCGCCGC GACTACATCC TCGCGCTCCG CGACTATTGG
CAGGCGTATT ACAGTCTAAG GCTGCTAACG CTTTACGACT TCCAACAAGG TTTAAAAATA
AGTTACTAA
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| Protein sequence | MTMRKLFIWI LVIWSGAVLA QTRKLTLEEV VQQAREQSIA SKQAVTQKKT NYWQYRSFLA
DYKPQLSLLG TVPGFTRSYI EVVQPDGTVS FQPVSNNNSM LNLSLSQSIA MTGGTVYVQQ
QMQRFDDFQR DVTRYNGIPF EIGIQQPLFR FNPLKWDRKI QPLKYQEGNQ QYIQALEQVA
LDATGFYFEL LVAQVNLQIA EKNRSNNDTL FKIARHKLEL GKISQNDLLQ LQMGLLTAQK
DLASAQQSAA VASLKLKMYM GSRDERALEL GIPSEAGEFA IDPQMALDEA FANRSASVAF
RRRLLEAERD VQLARKDNGL NATLNATFGL SNQGNLPRDV YRSPQDREFV ELQLTLPILT
WGRNKARTEV ARAAQEFAQQ SVEQDKLTFE QEIFTQVTLL QMLQKQVKLT EVADGIAADR
YQIAKERFIL SDLSVTDLGI ATQEKDIARR DYILALRDYW QAYYSLRLLT LYDFQQGLKI
SY
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