Gene Dfer_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5606 
Symbol 
ID8229221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6739521 
End bp6740747 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content47% 
IMG OID644933452 
Producthypothetical protein 
Protein accessionYP_003089961 
Protein GI255039340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGAG AGTTGATCAT CGTAGGCACG AGTATTGCGA ACCTGAACGG CCTTAACAAT 
TTGACCAATG TAACAAACGG GCTGCAGATA GTAGCGAATG CATCCCTCAC TTCACTGACA
GGGATTGGGA ATATCAACGA GCTTTGGCTC AGATTGGATG GTAACGACGC GCTGACCAGT
CTTGCAGGGA TGGAAGATTT CACCACAATC CACACACTGA CGATAGATGC TAATTCCCTC
ACCAGCCTGA GCGGACTCAA TAACCTGACT ACCGTCACCA ATGTATTCCA AATATCGAAC
GGGACGCCCA TTACTAACCT GACAGGACTG GAAAGTCTTA CCCGCGCAAA CAAGATAAGC
TTTCAAAACC TGACTTCGCT GTCGGATGTA AGCGCACTCG GCAATTTAAT TGTCGTGGAT
GATTGGCTCC AGATTGTGAA TTGCCCGATG CTATCCAACT TGAACGGTTT GTCGAAGTTA
GAGCAGATCG GAGATCTAAT TCTATTCGGG AATTCGTCCC TGGTTTCTCT GGCAGGCCTT
TCGAACCTGC GAGAAATAAC CAATTCATTA ACTATTCATA CTAACGTTCA ACTGAGTGAA
TGTGCAATAA GTGCTGTCTG TGATTATATA AGCGTGCCCG ATGCGTCGGC AAACATTACC
GGTAATTCGG GTACTTGCGC CGATGAAGAT GCCGTGCTCG CAGCCTGTGC TGCATTGCCT
GTTACATTGA TCAGTTTCAA CGCTGCCGAG GAAGCCGGAC AGGCACATCT TGCCTGGGAG
ACAGCGGAGG AAATCAACAG CAGGAGTTTT GATATTGAGA AGAGCCCGGA CGCCAAAAAT
TGGCATACTA TCGGGTCCGT TTTAGCGATG GGAAATAGCC AACAGCTTAA CAAATATTCT
TTTACAGATC AATACCCCTT TCCCTCTATC AATTATTACA GGTTGCGGTC GGAGGATCTG
GATGGATCTT ATAGTATTAG CAAGATTGTT TCCGTGGTCA TGTCGGGTGA AAATCAGCCT
GTGACATACC CTATGCCGGC TGTAAACGGT GTCTGGATAA AGGGGGTAGC AAATAGCAGC
GCAGAACTAC TCAATGTGCA TGGAAATGTA ATCAAGACCT GGACCATAAC TAATGAAAAA
AACTATCTTG AAATGGGATC ACTGTCACCT GGGCTATATT TGATACGGCT CAGCGGTCAG
ACGACGCTGC GGATAGTCAA GAAGTGA
 
Protein sequence
MGRELIIVGT SIANLNGLNN LTNVTNGLQI VANASLTSLT GIGNINELWL RLDGNDALTS 
LAGMEDFTTI HTLTIDANSL TSLSGLNNLT TVTNVFQISN GTPITNLTGL ESLTRANKIS
FQNLTSLSDV SALGNLIVVD DWLQIVNCPM LSNLNGLSKL EQIGDLILFG NSSLVSLAGL
SNLREITNSL TIHTNVQLSE CAISAVCDYI SVPDASANIT GNSGTCADED AVLAACAALP
VTLISFNAAE EAGQAHLAWE TAEEINSRSF DIEKSPDAKN WHTIGSVLAM GNSQQLNKYS
FTDQYPFPSI NYYRLRSEDL DGSYSISKIV SVVMSGENQP VTYPMPAVNG VWIKGVANSS
AELLNVHGNV IKTWTITNEK NYLEMGSLSP GLYLIRLSGQ TTLRIVKK