Gene Dfer_5576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5576 
Symbol 
ID8229191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6702967 
End bp6703506 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content51% 
IMG OID644933422 
Productouter membrane protein-like protein 
Protein accessionYP_003089931 
Protein GI255039310 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.904013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTA TTTTCCTTTT GACTACATGC GCGGCCCTCT CGGCGCTGCT GGCTTTTTCT 
GACCGCTTTG CCGGTGAGCA GCATTACCTG TCCGAATCCC CCGACCAGCA ATTTGTGACA
GAGGCCGCCG AAGGCGGAAT GCTGGAAGTA AAACTGGGTG AGCTGGCTTC GCAAAACGGC
GTTTCACAGG AGGTGAAAAC ATTCGCGAAG ACAATGGTAA CCGACCACAC AAAAGTAAAT
GAGGAGTTGA AGGCTTTGGC ACAGAAAAAG CAACTGAGCA TTCCGACAGG GCTGAGCGCG
AAAAAACAGC AGAAATTCGA CAGCCTGGCC GTATTTAAGG GAGAGCAATT CGATATGCTC
TATATGAACA TGATGATCGC CTCGCATGAG CAGACGATCG GACTTTTCCA GACGGAGTCG
AACAAAGGAC AGGACCCGGA ATTGAAGAAA TGGGCCGATG CCAAAGTGCC GGCCCTGAAA
CACCATCTTG AAATGGCCAA GAAGCTTTTC AAAGCTTCTC CGGGTGCAGC GAAGCATTAA
 
Protein sequence
MRSIFLLTTC AALSALLAFS DRFAGEQHYL SESPDQQFVT EAAEGGMLEV KLGELASQNG 
VSQEVKTFAK TMVTDHTKVN EELKALAQKK QLSIPTGLSA KKQQKFDSLA VFKGEQFDML
YMNMMIASHE QTIGLFQTES NKGQDPELKK WADAKVPALK HHLEMAKKLF KASPGAAKH