| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5555 |
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| Symbol | |
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| ID | 8229170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6682252 |
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| End bp | 6683067 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933401 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003089910 |
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| Protein GI | 255039289 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.417705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATC CGAAATCCGA TAAACTGGCT TCTCCCATCG CGTATTCCTG CTATTTCACG
CGGAATCGCG AGGGCGAGCA GTTTGCGCCC GAACATGTGT TCAGCTACCA GATCTCCGGC
ACGCTTACGA TCAATAATGG CGAAAAGGAG TACGTTTTCA AGGAAGGCGA CTACCGGTTT
ATCCGGCGTA ACCAGCTTGT GAAGTTTGTA AAACAGCCGC CGGTTGACGG TGTTTTCAAG
TCCATATCCA TTTATCTCGA CCAGCCGACG CTCCGCAGCT TCGCAATGGA ACATGGCTAC
CAGGCGCATC CCGGTAGCCA TGCCGCAGAG CCCATTATCG CATTAAAAGG CGGCAGCCTC
GTGAAGGGGT TCATGGATTC GCTGATGCCT TACAGCTTGG ACGACCAGCT GATCGACGCG
GATTTGCAGG CATTGAAACT GCGCGAAGCG ATTATGATCC TGCTGCGATC ATCGCCCGAA
ATGGCCGGCA TCCTGTTCGA TTTCAGCGAA CCGGGCAAGA TCGACCTGGA AGCATTTATG
CACAAAAACT TCCATTTCAA TGTGCAGCTA AGCCGTTTCG CTTATCTGAC GGGACGAAGC
CTCGCCACGT TCAAGCGCGA TTTCGAGCAC ATATTTCACA CGTCGCCCAG CCGGTGGTTG
CAGCAGCGAA GGTTGCAGGA GGCGCATTAT CTCATGAAGG AGAAAGGCCG CACGGCCTCC
GAGGTGTACC TTGAGATCGG TTTTGAAGAC CTCTCGCATT TTTCCTTCGC CTTCAAAAAG
ATGTTTGGCA TCCCGCCGTC GCGGCTTGCG GGTTAA
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| Protein sequence | MVDPKSDKLA SPIAYSCYFT RNREGEQFAP EHVFSYQISG TLTINNGEKE YVFKEGDYRF
IRRNQLVKFV KQPPVDGVFK SISIYLDQPT LRSFAMEHGY QAHPGSHAAE PIIALKGGSL
VKGFMDSLMP YSLDDQLIDA DLQALKLREA IMILLRSSPE MAGILFDFSE PGKIDLEAFM
HKNFHFNVQL SRFAYLTGRS LATFKRDFEH IFHTSPSRWL QQRRLQEAHY LMKEKGRTAS
EVYLEIGFED LSHFSFAFKK MFGIPPSRLA G
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