Gene Dfer_5551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5551 
Symbol 
ID8229166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6679075 
End bp6679476 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content47% 
IMG OID644933397 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003089906 
Protein GI255039285 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.832185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACT ATCAGCAAGA AGTAATGCGG ATCAAGGCCC TTTGTTACCC CAATGACAAG 
CAGCTGGAAG CGGTGATTGG CATCCGACAC TATATGGACA AAAACTTCGA CGCCGACATT
AATCTGGATT TCCTGTCGGA CATCAGGTTT ACTTCCAAGT TCCATTTGCT ACGGCTTTTC
AAACGGTATT ACGGGATTAC TCCGAAGCAG TACCTGACGA TCAGGCGGAT CGAAGAATCG
AAAAGGTGTT TGAAAAACGG CATGTCCGTT TCACAAACCT GCTACACTGT CGGTTTCGAA
ACGCCCAGCT CATTCAGCAC TTTGTTCAAG AAAAAAGTGG GCATTTGCCC CGTCCGGTTT
CAAAAAGAGC AATTTCTACA AAGCCCGTCT CGCAGCGTTT AG
 
Protein sequence
MNYYQQEVMR IKALCYPNDK QLEAVIGIRH YMDKNFDADI NLDFLSDIRF TSKFHLLRLF 
KRYYGITPKQ YLTIRRIEES KRCLKNGMSV SQTCYTVGFE TPSSFSTLFK KKVGICPVRF
QKEQFLQSPS RSV