Gene Dfer_5548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5548 
Symbol 
ID8229163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6677670 
End bp6677993 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content57% 
IMG OID644933394 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003089903 
Protein GI255039282 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA ACAAAGACGC GACATGCCCC ATTGCGGCCA CGCTGGCTTA CATTAGTGGG 
CGGTGGAAGG CGGCCATTTT GCACCATCTG GCGGCGGGTA CGCGGCGTTT CGGCGAGATC
GCCGTCCGGA TGCCGCCCAT TTCTAAAAAG GTTTTGACCC AGCAATTGAA GGAGCTCGAA
CGGGACGGCC TGATCCGCCG CGTTCAGAAT CCCGGGGCGC CGATGCGGGT GGAATATTCG
CTGACTGACC TGGGCAAAAG CCTTTCCACG GTGCTCAAAG AAATGTCCGA CTGGGGAAAA
GCAAATGTCC TGGCAAAGAA GTAA
 
Protein sequence
MANNKDATCP IAATLAYISG RWKAAILHHL AAGTRRFGEI AVRMPPISKK VLTQQLKELE 
RDGLIRRVQN PGAPMRVEYS LTDLGKSLST VLKEMSDWGK ANVLAKK