| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5545 |
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| Symbol | |
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| ID | 8229160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6674027 |
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| End bp | 6676393 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933391 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089900 |
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| Protein GI | 255039279 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.366096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.609704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAA ACTACTTCAA GATCGCCTGG CGCAATATCG TCCGCCAGAA AGCATACTCC
CTGCTGAACA TTGCGGGCTT GTCCATTGGC ATGGCTTGCA GCATTCTGAT CCTTTTATGG
GTGCAAAACG AGCTGAGTTA CGACCGCTTT CACCCCCGCG CCGAGCAGCT TTTCCGGCTC
ACATGCAGCG CGGGGGATTT CAGGGCGGCG GTGAGTGCGG CGGGGATGGC GCGCGGACTA
AAATCGGAAC TGCCGCAGAT CAAAAACGGG CTGCGGATCA GTAAATGGGC GCCGAAACTC
GTGGAAGTGG GCGACAAAAA ACTGGAAGAA AAACGGGTCA TTTACGCCGA TTCCAATTTT
CTGGATTTTT TCACTTTTCC ACTTTTGGCG GGCAACAAAG CCACAGCCTT GCAGGACCCG
GGAGGGATTC TGATCACGGA GGAAATGGCC ATGAAATATT TCAATACCCG CCAGGCGGTG
GGAAAAACCA TCCGCATGGA TAACAAAGAC AACTTTACCG TCGCCGGTGT ATTGGCCAAT
ACGCCCCCCA ACTCGCATTT GCAATTCGAT TTCCTGATCC CCATGAAAAC GCTGGCCAGG
ACGAGCTCCG ACTTGCAAAA CGATTCATGG GACAATTTTG TCTTTTACAC CTACCTCGAA
CTCGACGCCC AAACCGCCGC GTCTTCATCT GCCCGCGACA AGCTGATCAA GCAGATGTTC
TCGGTTTTCA AAGCCCACGG GCCTACCATC CAGCTCGATT TCGAATTGCA GCCCGTCACC
GACATTCACC TCCATTCCAA TTACCAGCTC GACGTGGCCG GTCACGGTAA CATTCAGTAT
GTCAATGTGT TCTTCGTCGT GGCGATCTTT ATTCTCGTGG TGGCCTGCAT CAACTTCATG
AACCTCGCCA CCGCGCGTTC CGAACGCCGG GCTAAGGAGG TGGGCTTGCG CAAAGTGGTA
GGCGCGAACC GATATCAGCT TGTTTTTCAG TTTCTGGGAG AGGCGCTTAT CTTTTCGTTC
TTGTCGCTGG TGATCGCCAT CGGTCTTGTG TATTTGTTAC TTCCCATATT TCAAATGCTG
GCGGAAAAGA ACCTTACCAT TCAATTGCTG GACGGGAAAC TGCTGCTCAG CCTGATCGGC
ATTGCCATGC TCACGGGCTT GCTTTCGGGA AGTTACCCGG CATTATTCCT GTCCGGATTT
GCGCCCGTGA AGGTCCTCAA AGGCAAAATG AAGGTGGCTG GCGGGAATCT GCTTTTCCGG
AATGCATTGG TTGTTACACA GTTCGTAGTA GCGATCGTTT TGCTGGTGGG CACTGCCGTG
GTTTACAAGC AATTGCATTT TATCAAGAAC CGTAACCTGG GTTTCGATAA ATCCAACCTG
CTTTATCTCC CCATGAACGG AGACCTTTGG GCGAAACAGC AGGTCCTGAA ATCGATGCTG
GCGCAGAATC AGCTGACGGA AAACTTTACC GTGATCTCCT CACTGCCTAC CGGAGTCGAA
TCCGGGACCG TCGACGTCGT TTGGGACGGG CAAACGTCAC GCAACCAGGT CGTGTTTCCA
TCGCTGGACG TGGATGAGAG TTTCATCAAT GTTTTCAAAA CGGAAGTGCT CGCGGGACGC
GGGTTCGAGA AGCGGTTTAG GGGAGATAGC TCTGCATTCA TGATCAATGA AAGGGCGATG
CAGATCATGG GGATGAATAT CGGTAATGCT GTCGGGAAAA ACCTGTCGCT TGGCGATCAG
AAAGGGACGA TCATCGGGGT TGTGAAAGAT TTCCATTTCA AATCCCTGCA ATATGCGATG
GAGCCGCTGA TCCTGCGCCT GAATAAATGG GGCGGGGTAG CGATGATCCG TACCAATGCC
GGTAAGAACG AGCAAACGAT CGCGGCATTG GAAAAGATCA ACCACCAGCT TAATCCCGCG
TTTCCATTCC AATTCGGTTT TCTGGACAAA GACCTGGATA ATCTCTACCG GAGCGAGCAG
CAGATGGGCA GCATTTTCAA CCTGTTCGCC GGCCTGGCGA TCTTCATCTC TTGTCTGGGT
TTATACGGAT TATCCGCCTT CATGGCCGAG CAGCGCACGA AGGAAATAGG CGTGCGCAAG
GTGCTCGGTG CCACCGTCGC CGGCTTGGTA GGCCTGCTTT CCCAGGATTT TCTGAAACTG
ATAGGCATTG CTATTGTGAT CGCTTCGCCC ATTGCCTGGT ATGCTATGAA TCAATGGCTC
CAAGGATTTG CTTACCAAAC TACCCTCGAA TGGTGGGTAA TTGCCCTGGC CGCGGTGCTG
GCGACGGGCA TTGCGATGTT TACGATCAGC TTTCAGAGCA TCAAAGCAGC GCTGATGAAC
CCCGTCAAAA GTTTGCGAAG CGAATAG
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| Protein sequence | MLKNYFKIAW RNIVRQKAYS LLNIAGLSIG MACSILILLW VQNELSYDRF HPRAEQLFRL
TCSAGDFRAA VSAAGMARGL KSELPQIKNG LRISKWAPKL VEVGDKKLEE KRVIYADSNF
LDFFTFPLLA GNKATALQDP GGILITEEMA MKYFNTRQAV GKTIRMDNKD NFTVAGVLAN
TPPNSHLQFD FLIPMKTLAR TSSDLQNDSW DNFVFYTYLE LDAQTAASSS ARDKLIKQMF
SVFKAHGPTI QLDFELQPVT DIHLHSNYQL DVAGHGNIQY VNVFFVVAIF ILVVACINFM
NLATARSERR AKEVGLRKVV GANRYQLVFQ FLGEALIFSF LSLVIAIGLV YLLLPIFQML
AEKNLTIQLL DGKLLLSLIG IAMLTGLLSG SYPALFLSGF APVKVLKGKM KVAGGNLLFR
NALVVTQFVV AIVLLVGTAV VYKQLHFIKN RNLGFDKSNL LYLPMNGDLW AKQQVLKSML
AQNQLTENFT VISSLPTGVE SGTVDVVWDG QTSRNQVVFP SLDVDESFIN VFKTEVLAGR
GFEKRFRGDS SAFMINERAM QIMGMNIGNA VGKNLSLGDQ KGTIIGVVKD FHFKSLQYAM
EPLILRLNKW GGVAMIRTNA GKNEQTIAAL EKINHQLNPA FPFQFGFLDK DLDNLYRSEQ
QMGSIFNLFA GLAIFISCLG LYGLSAFMAE QRTKEIGVRK VLGATVAGLV GLLSQDFLKL
IGIAIVIASP IAWYAMNQWL QGFAYQTTLE WWVIALAAVL ATGIAMFTIS FQSIKAALMN
PVKSLRSE
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