| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5508 |
|---|
| Symbol | |
|---|
| ID | 8229123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6634266 |
|---|
| End bp | 6635582 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644933355 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003089864 |
|---|
| Protein GI | 255039243 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGA AAACGCTTAA AGAATTGCTG GATGAGCGCG CCCTGAAAGC AGAGGCCGCT
GATACAGCTT CCAAGGTTGG GGATGCCGAG AGCCGGAATC TCACACCGGA TGAGTTTAAA
ACATTCAACG ACCTACTTGG AGAAGTTCGG GCGTTGGACG AGCAAATTGT ACAGGCGAGA
GCTATTGAGG CTTTCCAGGC TGGCCGCGCA CAGGGATTCC CCGGCGGTGG AGAGAGCGGA
AACCGTGACA CTTCTGCCGG TGATCAGCGT GATATGTCGG GTTACAACCT GAACAAGGCG
CTTCTTGCAA AAGTTGACGG TCGCGCACTG GATGGTGTGG AGGCTGAGGT TCAGCAAATG
GCCGAGGCAA GGGCGAGAGA GGACGGCATT AAGCTGAACG GCAATGGCGT TGTAGTACTC
GACGAAGTAT TGCAGAAACG TGGACAGACC GTTACCCTTC AAACTGCGAA CCCTGGCGAT
CAGGGTGGAC TTTTGGTGCC AAAGCAGATG CAAGGCGTTT TGGGCATCAT GCAGGCAAAT
ACTTTCCTCG ATAAGGTAGG CGCGCGCTTT ATGACTGGCC TTAGCGGAGA CCTGGTTTTC
CCGGTACAGG AAACGACCCC GGTTATTCAG GAGTTGACTG AGATTGAAGA GGGCGACGAC
ACCGAAGTTC TGTTCAGTTC ATTCGAGATG AAGCCACAGC GCAGGTTTAC CAATGTGCCT
ATCTCTCGTC AGCTGTTGAT TCAGTCATCG ATCGATATGC AAAACTTTGT GATTACAGCG
ATCGGTGTAG CTCTTTCTCA GAAAATGAAT GCTGAGGCAG TGGCGCATTT GTTAACTATC
ATTACGTCTG GAAATGGCAA CCTGATTTCA TTGGGGACCA ATGGTGACGC AATCGATTAC
AATGATGTCG TTGCCCTGGA AGCTCTTATC GAAGGCTTCG ACCACTTGCG CGGCGAGGCT
AAATACCTTA CCAATAGCAA GGTTAAGGCT AAGCTGAAAA CCACTCAGAT TTTCACCGGT
ACAAATGGTG TGCCTGTTTG GGGTGGAGAC GATGTGCTTA ACGGCTATCG TGCGATCTCG
TCCAATATTG TACCATCGAA CATTACGAAA GGTACTGGAA CAAACCTGTC CGCGCTTTTC
CTTGGTATCT GGTCTGATTT CATGGTTGGA TTGTGGGGTG GTACTGAGTA CATCATCGAC
CACATCACAC TTAAAAAGAA AGCGCAGCTG GAAATTACGG CGAATGCTTT CTGGAACATG
AAAGCCGCTC GTGCGAAATC GTTTGCCGGG ATCAAAGATA TCGTGACCAC GCTGTAA
|
|---|
| Protein sequence | MAKKTLKELL DERALKAEAA DTASKVGDAE SRNLTPDEFK TFNDLLGEVR ALDEQIVQAR
AIEAFQAGRA QGFPGGGESG NRDTSAGDQR DMSGYNLNKA LLAKVDGRAL DGVEAEVQQM
AEARAREDGI KLNGNGVVVL DEVLQKRGQT VTLQTANPGD QGGLLVPKQM QGVLGIMQAN
TFLDKVGARF MTGLSGDLVF PVQETTPVIQ ELTEIEEGDD TEVLFSSFEM KPQRRFTNVP
ISRQLLIQSS IDMQNFVITA IGVALSQKMN AEAVAHLLTI ITSGNGNLIS LGTNGDAIDY
NDVVALEALI EGFDHLRGEA KYLTNSKVKA KLKTTQIFTG TNGVPVWGGD DVLNGYRAIS
SNIVPSNITK GTGTNLSALF LGIWSDFMVG LWGGTEYIID HITLKKKAQL EITANAFWNM
KAARAKSFAG IKDIVTTL
|
|---|
| |