Gene Dfer_5507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5507 
Symbol 
ID8229122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6633649 
End bp6634239 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content48% 
IMG OID644933354 
Productpeptidase U35 phage prohead HK97 
Protein accessionYP_003089863 
Protein GI255039242 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA GGGTTCTTCC GCAGGAGCTG AGCGAGGTAA GGGCGATCAA GAATGAGCAA 
GGGGTTTGGC ATATCCCTGG GAAAGCTATT GTTTTCAATC AGCGTTCCCG AAAAATCGGC
TGGTTTTATG AGGTAATTGA TTCGAGAGCC CTTGAAGGTG CGCGTATCGA CGATGCAATT
TCGTGCTTTA ACCACAACAC GAGCATCATT TTGGGATCCG TTCGCAACCA GACAACCAGC
TATACGATTA CGCCGGGTGC TATGGAGTAC GACATTCTTC CGCCCGATAA TCAGCATACG
CAGGACGTTG TGATTGCGCC GATTGTACGC CGGGACGTTA CCGGCAGTTC TTTCATGTTC
AATGCAGCGA GAAAGGGCGA CGAATGGGTT GAGGAGGATG GTATTTATGT TCGTTACGTC
AAAAAGATCG AAGAGGTTTA CGAGTTCGGA CCCGTATCGA TGCCAGCTTA CATGAATACT
TCGACGGATG TTGCAAAGCG CTCTTATGAT GACTTCATCA AGGAGCATAA ACAGCAAGAA
ATTGCTTTCA GAAGTCAGTT TGCCAAAATG CAACTGGCTC TTTACCGATA A
 
Protein sequence
METRVLPQEL SEVRAIKNEQ GVWHIPGKAI VFNQRSRKIG WFYEVIDSRA LEGARIDDAI 
SCFNHNTSII LGSVRNQTTS YTITPGAMEY DILPPDNQHT QDVVIAPIVR RDVTGSSFMF
NAARKGDEWV EEDGIYVRYV KKIEEVYEFG PVSMPAYMNT STDVAKRSYD DFIKEHKQQE
IAFRSQFAKM QLALYR