Gene Dfer_5483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5483 
Symbol 
ID8229095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6614593 
End bp6615555 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content51% 
IMG OID644933327 
Productvon Willebrand factor type A 
Protein accessionYP_003089839 
Protein GI255039218 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID[TIGR01168] Gram-positive signal peptide, YSIRK family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA ATTACCCCTT TGGAAGCACC GAATATTTTT TTATATTTTT TTTCATTTTC 
GCTTACACAG CTTACATAAT CCGCACTGTG AGGATCGCGA GGCAGCTCCA AACCACCGCC
CGCACACTTA TCATCAAACT CTTTTTGCGC AGCATTACCT TCTCACTTTT GATCATCAGC
CTCCTCGGCC CGTCGTTCGG AGAGGCCGAG CGCGACATTC AGGCGAAGGG TAAGGATATT
TTCATGGTCG TCGATCTTTC GAAATCCATG GATGCAGCGG ACGTGACGCC CTCGCGCCTG
GAAAAAGTCA AGTTTGAGCT CAACCGGTTC ATCGAAAACG AACGCGCGAA CCGCATCGGG
ATCATCATCT TCTCCAACGA CGCCTACATA CACGTGCCGC TCACGTACGA CGCAGCCGCG
CTCGAACTGT TTATCCAGTC GCTGCAAACA GACCTGCTCC CAACGAATGG TACCAATGTG
TGCGGCGCCA TTGAAATGGC CTACAATAAG CTGATGAACT CCGCCGACCC GACGAGCCGG
GCCAAAATGA TGGTGCTATT TACCGATGGC GAGAACAGCA GCAGCTGCAC CAATGCATTA
TTCAATAACC TGCGCCGCTT CGGCATCGGG GTATATTCGG TGGCCGTGGG TACGAAAGTG
GGCATCAGCA TTCAGGAGAA CGGGAAGCCG TTGAAGGACA AAAACGACAA GCTGGTGATC
AGCAAGCTGG ACGAGAATTT CCTGCGCGGC ATCGCCAACT CCTCGCGGGG CAGCTATTAT
GAGTTGAATA ATTCCAAAAA CGACATTCAG AAGCTGATCA GCGACATTAA CCAGGCTGAG
GGCGCATTGG TAGATTCGCG GACGATCACT GTCGTTTCGA ACAAATACTA TTATTTCCTA
GGCGCGGCGC TGGTGCTGAT CCTGCTGGAT GTACTAATTA CCATCGGAAC GTTTCGACTG
TAA
 
Protein sequence
MNWNYPFGST EYFFIFFFIF AYTAYIIRTV RIARQLQTTA RTLIIKLFLR SITFSLLIIS 
LLGPSFGEAE RDIQAKGKDI FMVVDLSKSM DAADVTPSRL EKVKFELNRF IENERANRIG
IIIFSNDAYI HVPLTYDAAA LELFIQSLQT DLLPTNGTNV CGAIEMAYNK LMNSADPTSR
AKMMVLFTDG ENSSSCTNAL FNNLRRFGIG VYSVAVGTKV GISIQENGKP LKDKNDKLVI
SKLDENFLRG IANSSRGSYY ELNNSKNDIQ KLISDINQAE GALVDSRTIT VVSNKYYYFL
GAALVLILLD VLITIGTFRL