| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5479 |
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| Symbol | |
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| ID | 8229091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6607430 |
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| End bp | 6612010 |
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| Gene Length | 4581 bp |
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| Protein Length | 1526 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933323 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_003089835 |
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| Protein GI | 255039214 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAA TGTCTGAACA AATGGTAGAA AATCAGGGAC TGTATCGCCC GGAATTTGAG
CATGATGCAT GTGGAATCGG TTTCCGGGCT AACATCAAGG GTCGTAAGTC GCACCAGATC
GTGGCTGATG CCATTCATAT GCTCGAAAGG ATGGAGCATA GGGGTGCAAC TGGTTTTGAC
CCTAACACCG GTGACGGTGC TGGTATTTTA ATTCAGATCC CTCACGAGTT CTTTGTAGAA
GAATCTACCA AATTGGGCTT CCACCTGCCG CCGGCAGGTG AGTATGGTGT GGGGATGATC
TTTTTCCCAG GCAACGAGCT TGCCAGGGAA GAAAGCAGGG ATATCCTGAA CCGAAAGATC
AAGAAGCTGG GCCTGCAACT GCTCGGCTAC CGCAAGGTTC CTACACTGAA CAATACATTG
GGTGAAGGCT CTCTTTCCGT TGAACCGGCG GTAGAGCAGG TTTTCATCAA ACGTCCGGAC
GACATTACGG ACGATATGGC ATTTGAACGC AAGCTGTTTA TCCTCCGTCA GGTTGCTGCC
AGATTGATTA AAGACACGGT AAAAGGCGCG AAAAACTTCT ATTTCTCGTC GCTTTCATGC
CGTACCATCT CATATAAAGG ACAGCTTACC ACTGCCCAGT TGAAATATTA CTTCCCGGAC
CTGGAAAACG AGTCGGTCGT ATCTGCATTG GCAGTTGTAC ACTCGCGTTT CTCGACCAAC
ACATTCCCAT CATGGGAGCT TGCCCAGCCA TTCCGCTACA TTGCGCACAA TGGGGAGATC
AACACCGTGA AAGGTAATGT GAACTGGATC CGCGCCGGGG AAAAATCGTT CGAGTCGAAA
TTCTTCTCGA AAGAGGAAAT GGATATGCTC CTCCCGATTT GCGACAGGAA CCAGTCCGAC
TCCGCCAATC TCGACAATGC GATCGAATTG CTGCACCTTT CGGGCCGCTC ATTGCCGCAT
GTAATGATGA TGCTCATCCC CGAAGCATGG GACGGCAACG AACAAATGGA TCCTGAGCGT
AAGGCATTCT ACGAATACCA CGCGGCCATT ATGGAGCCGT GGGACGGTCC TGCGTCGATC
TCATTCACCG ATGGTAAAAT GGTAGGCGCC ACGCTCGACC GTAACGGTCT GCGCCCGTCA
CGCTACTGGG TACTCGACGA CGATACCATT ATCATGGGCT CGGAAGCGGG TGTACTGGAA
GTGGATCAGG CACGCGTGGT AACCAAAGGC CGCCTGCAGC CCGGACGGAT GTTCGTGGTG
GATATGGAGC AGGGCCGCAT TGTTCCCGAC GAAGAAATCA AAAACCAGAT CTGCACCGCG
CAGCCTTACC AGCAATGGCT GGACGATAAC AAGCTGCACG TGGACGCATT GGATCACCCG
ATCCGCACCT ACCGCGCTTA CGACGACAAT GCATTGCTGA AACGCCAGGT TGCATTCGGT
TATACTTCGG AAGATCTGCG CATGATCCTC GGACCAATGG GTCAGACGGG CTTGGAAGCG
ATCGGTTCAA TGGGTACTGA CTCTCCGCTG GCAGTCCTTT CGGATCAGTC GCAGCATTTG
TCTACGTATT TCAAACAGCT TTTCGCACAG GTGACCAACC CGCCGATCGA CTCGATCCGC
GAGCGTGCGA TCATGTCTTT GATCTCTTTC GTAGGCAGCA CCGAGAACAT TCTTACGGAA
TCACCCAAGC ATTGCCGCCA GATCGCATTG CCGCATCCGA TCCTTTCGGT GCAGGAATTC
GACAAGCTGC GTTTTGTAGA TAAAGACGGC TTCCAGGCCA AAACCATCAA TACCTACTTC
CGTGCCGACC AGGGCGGAAA AGCACTGGAA AGAGCATTGG AACGCATTTG CCGTTACGCG
GTAGACGCTA TCGAAGACGG ATTTGAAATC CTCATCCTCT CCGACCGCGC CATCGACTCC
GACCACGCGC CGATCCCTTC ATTGCTCGCC ACAGCGACGA TCCACCACCA TTTGATCCGC
GAGGGATTGA GAGGAAAAGT AGGTTTGTTG GTAGAAGCGG GAGACGTTTG GGAAACCCAC
CACGTAGCGA CATTGATCGG CTACGGCGCT GCGGGTATCT GCCCTTACAT GGCATTCGAA
ACGCTTGCGT ACATGAACCG CAAGGGAATG ATCGAAGGCG AGTTCACCGA CGAAAAACTG
CATTACAACT ATATCAAGGC CGTTAACAAG GAGCTTTTGA AGATTTTCTC AAAAATGGGA
ATCTCTACCC TGCAATCGTA CCAGGGTGCG CAGATCTTCG AATGCGTGGG CTTGAACAAG
GATGTAATCG ATAAATATTT CACAGGAACC ATCTCGCGCA TCAGCGGTAT GGGCATTCCT
GAAATTGCAC GCGAAATCCT GACCCGCCAT AAAGTGGCTT ACCACGAAAG CGCGGAGCAG
AAACCACGAC TCGAAGTAGG TGGTGTTTAC CAATGGAAAC AACGTGGTGA AGCACACATC
TTCAACCCGC AGTCGGTGCA TTTGCTGCAA CAATCCACCC GCAATGCGAG CTACGAGCAG
TTCAAGAAAT ACTCCAAGCT GATCGACGAC CAGAGCCACA AGGCGCTGAC ATTGCGCGGA
CTATTGAGAT TCAAAAAAGG CAACCCGATC CCTTTGAGCG AGGTGGAGCC GGTTGAAAAT
ATCTTCAAAC GCTTTGCGAC CGGCGCAATG TCCTTCGGAT CGATCTCCTG GGAAGCGCAC
ACGACCCTGG CGATTGCGAT GAACCGCATT GGCGGTAAGT CCAACTCCGG TGAAGGCGGC
GAAGACGAAC TGCGTTACAA CAAGCTGCCG AACGGCGACA GCATGAACTC GCAGATCAAA
CAAGTTGCTT CGGGACGTTT TGGTGTAACC AGCCACTACC TGAGCAATGC GGGCGAGCTG
CAAATTAAAA CCGCGCAAGG TGCTAAACCG GGTGAAGGCG GTCAGCTTCC GGGCTTCAAG
GTGGACGACT GGATCGGCCG TACCCGTCAC TCGACGCCGG GCGTGGGCTT GATCTCCCCT
CCTCCTCACC ACGACATTTA TTCGATCGAG GATTTGGCGC AGCTGATTTT CGACCTTAAA
AATGCCAACC GCGCGGCACG CATCAGCGTG AAGCTGGTAT CCGAAGCCGG CGTAGGAACC
GTGGCATCCG GTGTAGCGAA AGCGCACGCC GACCACATCC TGATCTCGGG TTACGACGGT
GGTACCGGTG CTTCTCCATT GAGCTCGATC CGCCACGCGG GTCTTCCGTG GGAACTTGGC
CTCGCCGAAA CGCACCAGAC TTTGGTAAGA AACAAACTGC GCGGACGGGT AACCGTTCAG
GCCGACGGAC AGCTCCGTAC CGGCCGCGAC CTCGCGATCG CCGCATTGCT CGGTGCCGAA
GAATGGGGTG TAGCCACGGC CGCATTGGTA GCCGCCGGCT GTATCATGAT GCGTAAATGC
CACCTGAACA CCTGTCCGGT GGGTGTGGCT ACGCAGCGCA AAGAGCTCCG CGCCTTGTTC
TCGGGTAAGC CTGAGCACGT GGTGAACATG TTTACCTACA TGGCGGAAGA ACTGCGCGAG
ATCATGGCCC AGCTTGGTTT CAGAACAGTG AATGAAATGG TTGGTCAGGC CCAGTACCTC
GAACTGCGCA ATGATATCAA ACATTGGAAA TATAAAAACC TGAACTTCGA CGCGATCCTG
TACAAAGAAG GCGACCTTTC GGTGGCGCAA TTCAAGCAGG AAGAGCAGGA TCACGGTATC
GACGCCATTC TCGACCTCGA CCTGATCCGT TCGGCACAGC CCGCATTGGA GAAGCAGGAT
GAAGTTTACG CAGAATTCCC GATCAACAAC CTGAACCGGT CGGTGGGAAC CATGCTTTCG
AACGAAATCT CGAAGAAATA CGGCGGCACC GGCTTGCCGA ATGGCAATGT CCACTTCAAA
TTCCGCGGTA CTGCGGGCCA GAGCTTCGGT GCATTCAACA CGTTGGGTGT GCGCCTCGAA
CTGGAAGGTG ACGCGAACGA TTACTTCGGC AAAGGCCTCT GCGGCGCCGA ACTGATCGTG
TACCCCGACC GCGACGCGAA GTTCAAGCCG GAAGAAAACA TTATCATCGG TAACGTGGCA
TTCTACGGTG CTACTTCGGG TGACGCCTAC ATCCGCGGAA CGGCGGGCGA GCGCTTCTGC
GTACGTAACT CGGGTGCGAA AGTGGTTGTG GAAGGAGTCG GCGACCACGG TCTGGAATAC
ATGACGGGCG GTCTGGCGAT CATCCTGGGC GAAACAGGCC GCAACTTCGC AGCGGGTATG
TCCGGCGGTG TGGCTTACGT CCTCGACAAA GCAGGCAATT TCGAAGAGAA AGTGAATAAA
GAAATGGTGA CGCTGGAACC ATTGAACGAG GAAGACCAGG GCATTCTTCG CGAGTACCTG
GACAAACACT TCCAGTACAC GACCAGCAAC ATCGCTTTCC AACTGATCCA GAACTGGGGA
GAATCTGTGA AGCAATTTGT GAAAGTAATG CCGTCCGACT TCCGCAAAGC GCTGGAAGGA
CGCGGTATCA CGCTCGCACA GCAGATTGCA GACAAGAACG TGGTGTACAA AGACATCGTC
GTAGACGTAG TACACCAGTA A
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| Protein sequence | MSQMSEQMVE NQGLYRPEFE HDACGIGFRA NIKGRKSHQI VADAIHMLER MEHRGATGFD
PNTGDGAGIL IQIPHEFFVE ESTKLGFHLP PAGEYGVGMI FFPGNELARE ESRDILNRKI
KKLGLQLLGY RKVPTLNNTL GEGSLSVEPA VEQVFIKRPD DITDDMAFER KLFILRQVAA
RLIKDTVKGA KNFYFSSLSC RTISYKGQLT TAQLKYYFPD LENESVVSAL AVVHSRFSTN
TFPSWELAQP FRYIAHNGEI NTVKGNVNWI RAGEKSFESK FFSKEEMDML LPICDRNQSD
SANLDNAIEL LHLSGRSLPH VMMMLIPEAW DGNEQMDPER KAFYEYHAAI MEPWDGPASI
SFTDGKMVGA TLDRNGLRPS RYWVLDDDTI IMGSEAGVLE VDQARVVTKG RLQPGRMFVV
DMEQGRIVPD EEIKNQICTA QPYQQWLDDN KLHVDALDHP IRTYRAYDDN ALLKRQVAFG
YTSEDLRMIL GPMGQTGLEA IGSMGTDSPL AVLSDQSQHL STYFKQLFAQ VTNPPIDSIR
ERAIMSLISF VGSTENILTE SPKHCRQIAL PHPILSVQEF DKLRFVDKDG FQAKTINTYF
RADQGGKALE RALERICRYA VDAIEDGFEI LILSDRAIDS DHAPIPSLLA TATIHHHLIR
EGLRGKVGLL VEAGDVWETH HVATLIGYGA AGICPYMAFE TLAYMNRKGM IEGEFTDEKL
HYNYIKAVNK ELLKIFSKMG ISTLQSYQGA QIFECVGLNK DVIDKYFTGT ISRISGMGIP
EIAREILTRH KVAYHESAEQ KPRLEVGGVY QWKQRGEAHI FNPQSVHLLQ QSTRNASYEQ
FKKYSKLIDD QSHKALTLRG LLRFKKGNPI PLSEVEPVEN IFKRFATGAM SFGSISWEAH
TTLAIAMNRI GGKSNSGEGG EDELRYNKLP NGDSMNSQIK QVASGRFGVT SHYLSNAGEL
QIKTAQGAKP GEGGQLPGFK VDDWIGRTRH STPGVGLISP PPHHDIYSIE DLAQLIFDLK
NANRAARISV KLVSEAGVGT VASGVAKAHA DHILISGYDG GTGASPLSSI RHAGLPWELG
LAETHQTLVR NKLRGRVTVQ ADGQLRTGRD LAIAALLGAE EWGVATAALV AAGCIMMRKC
HLNTCPVGVA TQRKELRALF SGKPEHVVNM FTYMAEELRE IMAQLGFRTV NEMVGQAQYL
ELRNDIKHWK YKNLNFDAIL YKEGDLSVAQ FKQEEQDHGI DAILDLDLIR SAQPALEKQD
EVYAEFPINN LNRSVGTMLS NEISKKYGGT GLPNGNVHFK FRGTAGQSFG AFNTLGVRLE
LEGDANDYFG KGLCGAELIV YPDRDAKFKP EENIIIGNVA FYGATSGDAY IRGTAGERFC
VRNSGAKVVV EGVGDHGLEY MTGGLAIILG ETGRNFAAGM SGGVAYVLDK AGNFEEKVNK
EMVTLEPLNE EDQGILREYL DKHFQYTTSN IAFQLIQNWG ESVKQFVKVM PSDFRKALEG
RGITLAQQIA DKNVVYKDIV VDVVHQ
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