Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5478 |
Symbol | gltD |
ID | 8229090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6605872 |
End bp | 6607380 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644933322 |
Product | glutamate synthase subunit beta |
Protein accession | YP_003089834 |
Protein GI | 255039213 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAC CAACCGGATT TTTAGAGTTT GAAAGGGAGT TGCCGAAAAA AAGAAGCGTA GAAGAGCGCT TGAAGGACTA CCGTGAGATT GAAACGGCAC CGACCGACTC TAATTCCAAA CAGCAGGCAG CCCGTTGTAT GGACTGCGGA ATTCCTTTTT GCCATAATGG TTGTCCGCTG GGCAACATCA TTCCCGAGTT CAACGACGCG GTGTATGATG AAAACTGGGG ACTGGCTTAC GAAATATTAG CGTCTACCAA CAACTTCCCT GAATTCACAG GCCGCATTTG CCCCGCTCCT TGCGAAGCAT CCTGCGTGTT GGGCATCAAC AAGCCGCCGG TAGCGATCGA GTACATCGAG AAATCGATCA TCGAAAAAGC ATTCGAATTA GGTTTGGTTA AACCACGCAT TCCGAAAACC CGCACCGGCA AGAAAGTGGC TGTGGTAGGT TCTGGACCTG CGGGAATGGC AGCCGCTTAC CAGCTCAACC AGGCCGGTCA CTCGGTAGTA TTGCTCGAAA GAGCGGATAA AATCGGTGGT CTGGTTCGCT ACGGTATCCC CGATTTCAAG CTCGACAAAG GCATTATCGA CCGTCGTATG GCGGTGATGG AAGCGGAAGG CGTTGAATTC CGCACCGGCG TGAACGTGGG TGTGGATATC AAAGCGGAGG AGCTGCAAAA TGAGTTCGAC GCGGTGTTGC TGACGATGGG ATCGACCGTT CCGCGCGATG TGAAAATCGC AGGCCGTCAG TTCAAAGGCG TCCATTTCGC GATGGAATTC CTCAGCCAGC AGAACAAGCG CGTAGCCGGT ATCGACCGCG TGGTAGATCA CCGCGGCGTG GCTTACGCCA ATGGCGAAAT CCTCGCTACC GACAAACACG TGGTGGTAAT CGGCGGTGGC GATACAGGTT CCGACTGCGT GGGTACTTCG GGCCGTCACG GTGCGAAATC CGTTACGCAG ATCGAGCTGA TGCCTATTCC TCCAAAAGAG CGCGATGCAA GCACACCATG GCCGAACTGG CCGATGATGC TCCGTACGTC TACTTCACAC GAAGAAGGCT GCGACAGACA TTGGTCTATC AACACCAAAG AATTTATCGG TGACGAAAAC GGTAACCTCA CCGCATTGAA GATCGTAGAC CTCGACTGGC AGAAAGACCC TGAAACGGGC CGTATGCAGA TGAAAGAGGT GGAAGGCAGC GAGCGGACGA TCCCTTGCGA CCTGGCGTTC CTGGCAGCCG GCTTCCTGCA CCCGCAGCAA GAGGGCTTAC TGAACGACCT CGACCTGGAA TTCGACGAGC GCGGCAATAT CAAAACCAAC GGGTATCAAT CGACTTCAAA CGAGAAGATC TTCGCAGCAG GCGACTGCCG CCGCGGACAA TCGCTGGTAG TATGGGCGAT CTCCGAAGGC CGTGAAGCGG CGCGTTCGGT GGACGAGTAC CTGATGGGCG AGTCGTTCCT CGAAGCCAAG GCTGTATCGA TGCTGAATCC TTTATTTGCG CACGCGTAA
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Protein sequence | MGKPTGFLEF ERELPKKRSV EERLKDYREI ETAPTDSNSK QQAARCMDCG IPFCHNGCPL GNIIPEFNDA VYDENWGLAY EILASTNNFP EFTGRICPAP CEASCVLGIN KPPVAIEYIE KSIIEKAFEL GLVKPRIPKT RTGKKVAVVG SGPAGMAAAY QLNQAGHSVV LLERADKIGG LVRYGIPDFK LDKGIIDRRM AVMEAEGVEF RTGVNVGVDI KAEELQNEFD AVLLTMGSTV PRDVKIAGRQ FKGVHFAMEF LSQQNKRVAG IDRVVDHRGV AYANGEILAT DKHVVVIGGG DTGSDCVGTS GRHGAKSVTQ IELMPIPPKE RDASTPWPNW PMMLRTSTSH EEGCDRHWSI NTKEFIGDEN GNLTALKIVD LDWQKDPETG RMQMKEVEGS ERTIPCDLAF LAAGFLHPQQ EGLLNDLDLE FDERGNIKTN GYQSTSNEKI FAAGDCRRGQ SLVVWAISEG REAARSVDEY LMGESFLEAK AVSMLNPLFA HA
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