| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5457 |
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| Symbol | |
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| ID | 8229068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6581470 |
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| End bp | 6583251 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644933300 |
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| Product | Amidohydrolase 3 |
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| Protein accession | YP_003089813 |
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| Protein GI | 255039192 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.330446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTC AATTCCCCCG GATTCTGGCG GTACTCCTGT GCTGCCTGGC GGCACGGCAA
GGGTATACGC AAACTGCCGA TCTGATCATT CGCAATGGCA AGATCGCGAC CATGGCCAGG
GCGGGCGAAT TCGTAGGCGC CGTTGCCATT AAGGATGGCC TGATCCTCGC AACCGGCCCT
GAAAAGCAAT TGGTTTCGGC ACACAAAGGC CCTCGGACGA AGGTGATCGA CGCGAAGGGC
CGGACGGTAA TTCCCGGGCT GAACGACAGC CACATCCATA TCATCCGCGA AGGACTGAAC
TATAATGCCG AACTGCGCTG GGACGGGATC AGGAGCCTGA AAGAAGCCAT GCGCATGCTC
AGCGAACAGG CTAAGAGGAC GCCGCCGGGC GTCTGGATCA AGGTGGTGGG CGGATGGAAT
GAGTTTCAGT TCGAAGAAAA ACGGCAACCG ACGCTGGCAG AAATCAACGA AGCCGTCCCC
GACAAGCCGG TATTCATTTC CTATCTCTAC GGAAAAGCAT TCCTGAACCG CGCGGGGATC
CTGGCGCTGG GTTACGACAA AAACACGCGG TATGAAGGCA GCCTGGTGGA GCTCGACGGC
GAAGGAAACC CGACAGGCAT GCTCTTCGCC AAGGAAACCC CCAAGGCCAT TTATACCACA
CTCGCATTAA CCACCCGGCT CTCACCGGAA GAACAGCTCA ACAGTACAAT GCATTTTTAC
CGGGAGCTAA ACCGCTTCGG GCTCACATCG GCAGCCGATG CAGGCGGAGG CGGCCACAGC
TACCCGGCCG ACTATGCCGC CGCACTACAA CTGGCAAAAG CCGGGAAACT GACCATTAGA
ACATCCTATT TCCTGTTCTC ACAAGTGAAA GGAACCGAAT TGCGGGATTA TGAAAAATGG
CTGGAAACCA CCTATCCCAA CCACAACGAC CACCTGTTCC TCGCCAACGG TTACGCGGCG
GAAGGCGCCG GTGAAAACCT CGTAGCCTCC GCGGCCGATT TCGAAAATTT CCTCGAACCC
CGTACCATCC TGTCCGACAC GATGGAGGCG GACCTGGAAC CGGTAGTCCG GCTGTTGGTC
AAAAACCGAT GGCCGTTCCG CCTGCACGCC ACATACGGCG AATCGATCGA ACGGATGCTG
GCTGTATTTG AAAAAGTGAA TGCGGATACG CCTTTCAATG GCCTCCGCTG GTTTTTCGAC
CATGCCGAAA CCATCACAGA CGCGCAGCTC CAAAGGGTCA AAAAGCTGGG CGGCGGCATT
GCTGTTCAAT TCAGGATGTA TTTCCAGGGT GAATTATATC AAAAACTGTA CGGCCAGCCG
GTGCGCCAGC TGCCTCCCAT CCGGCAAATG CTTTCCCTGC GCATTCCCGT GGGCATGGGC
ACCGACGCGA CGAGGATCAC CTCCTACAAC CCGTGGATGG CCATGCATTG GCTGCTAACC
GGCAAAACCA TCGGCGGCGA GCAGTTCTGG CCGGAAGATC AGGCGCTCGA CAAGTTCACC
TCCCTGCAAC TATTCACAGC CGGCAGCGCC TGGTTTACCG GAGAGGAGCA TTTGAAAGGA
AAGCTGGTGC CCGGCATGTA CGCCGACCTG GCCATTCTTT CGGATGACTA CTTTTCCCTC
CCGCCCGATC GCGTACGCGA CCTCGAATCT GACCTAACGA TCGTGAACGG CAAAGTGGTG
TACGCATCGT CGTCTTTCCC GGAATATGCC GTCCCGGCGC CGCCGGTAAT CCCCGAATGG
TCGCCCATCC GGCATTTCGG CGGGTATCCG CGCAGCAAAT GA
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| Protein sequence | MKSQFPRILA VLLCCLAARQ GYTQTADLII RNGKIATMAR AGEFVGAVAI KDGLILATGP
EKQLVSAHKG PRTKVIDAKG RTVIPGLNDS HIHIIREGLN YNAELRWDGI RSLKEAMRML
SEQAKRTPPG VWIKVVGGWN EFQFEEKRQP TLAEINEAVP DKPVFISYLY GKAFLNRAGI
LALGYDKNTR YEGSLVELDG EGNPTGMLFA KETPKAIYTT LALTTRLSPE EQLNSTMHFY
RELNRFGLTS AADAGGGGHS YPADYAAALQ LAKAGKLTIR TSYFLFSQVK GTELRDYEKW
LETTYPNHND HLFLANGYAA EGAGENLVAS AADFENFLEP RTILSDTMEA DLEPVVRLLV
KNRWPFRLHA TYGESIERML AVFEKVNADT PFNGLRWFFD HAETITDAQL QRVKKLGGGI
AVQFRMYFQG ELYQKLYGQP VRQLPPIRQM LSLRIPVGMG TDATRITSYN PWMAMHWLLT
GKTIGGEQFW PEDQALDKFT SLQLFTAGSA WFTGEEHLKG KLVPGMYADL AILSDDYFSL
PPDRVRDLES DLTIVNGKVV YASSSFPEYA VPAPPVIPEW SPIRHFGGYP RSK
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