Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5455 |
Symbol | |
ID | 8229066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6579112 |
End bp | 6579990 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644933298 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003089811 |
Protein GI | 255039190 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.980475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.163061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAACA TCATACTTAC CGGGAGCAGC AGCGGATTCG GCCGGATTAC CGCCCAGGTC CTCGCCAAAG AAGGATACCA CGTGTTCGCA ACCATGCGAA ACCCCAAAAG CAAAAACCAG CTGATTGCCA CCTATTTATC CGAATGGGCA TTGAGCAACC GCCTGATGCT GACAGTGGTG GAACTGGACG TGACCGACGA AGACTCCGTC GCCAACGCGA TGGCCGAAAT AGCGGAAGCC ACCAACGGGC AGATCGACGT GCTGATCAAC AACGCCGGCA TCGGGTACAT TGGCCTGAAC GAAACGCTGA GCGCGGCTCA GGTCGACTGG ATGTTCCAGG TGAACGTAGT CGGCGCCGAC AGGATGATCA AAGCCGCGCT TCCGTATATG CATGAGCGTA AGGAAGGACT GATCATCAAC GTCTCCACCA TCGCTTCGCG GATGCCTATT CCAAACATGG GGATATTTTC GGCTACCAAA GCTGCATTGG AGGCACTCAC GATCAGCTAC TACTATGAAC TTGCATCGGT AGGGATCGGC ATTGCGCTCA TTCAACCGGG CACTTTTCCT TCCACCAACA TCATCGCAAA CCAGTTGGAG CCGGCAAACC CGCGCGCCGA AGCGTATTAC GGCGAGGAAA TGGGCAACAT CCGCCGGGCC CTGCTCGAAA GCTATATCCC CGGGCCGTTC AAGCCCGAAT GCATCGAGGT CGCCTACGCG ATACGCAACG TGATCGGCGT TCCGAGCCCG TTCCGCAGCT TGTGGACCAT CGTGCGCGGC GGGTTCAAAG AACAGTCCGT CCGGTATTTC AACCAGGCGA CGAGGGAGTT GGTAGACAGT TTCCTGGAAG TCACCGGCGT GGTTTACGAC GCCGAATAA
|
Protein sequence | MKNIILTGSS SGFGRITAQV LAKEGYHVFA TMRNPKSKNQ LIATYLSEWA LSNRLMLTVV ELDVTDEDSV ANAMAEIAEA TNGQIDVLIN NAGIGYIGLN ETLSAAQVDW MFQVNVVGAD RMIKAALPYM HERKEGLIIN VSTIASRMPI PNMGIFSATK AALEALTISY YYELASVGIG IALIQPGTFP STNIIANQLE PANPRAEAYY GEEMGNIRRA LLESYIPGPF KPECIEVAYA IRNVIGVPSP FRSLWTIVRG GFKEQSVRYF NQATRELVDS FLEVTGVVYD AE
|
| |