| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5454 |
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| Symbol | |
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| ID | 8229065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6578347 |
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| End bp | 6579042 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644933297 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_003089810 |
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| Protein GI | 255039189 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.532525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.249503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCA AGCTAACCTC AATGTTAATA GTGACCCTGT GTGCCATTTG CAATGCATTT
GCCCAAAAAC CGGCCGCCAC GCTGCTCACG CCCACCAACC ATACGCTCGT CATGATCGAC
CATCAGAGCC AGATGGCATT CGCGGTGAAG AACATCAGCA TCGAGCAGCT CAGGGACAAT
GTGGCGCTCG TGGCAGGCGG TTCGAAGATT TTCAAAGTGC CGACGGTGGT GACCACAGTA
GCCGAAAAAA CGTTCAGCGG ACCTGTTTTC CCGGAAATAC TCTCGGTGTA TCCACCGGTT
TCCTCGGGCT ATGTCGACCG CTCGACGATG AACCCCTGGG AGGACGCCGG CGCGCACAAG
GCCATCACTG CAAAAGGGCG TAAAAAGCTG GTCATGACAG GGCTATGGAC GGGCGTTTGC
GTGGCTTTGC CCGTGCTTTC GGCCATCCAG GAAGGGTACG AGGTGTATGT CATCACCGAT
GCGAGCGGCG ACCTTACCCT CGAAGCCCAC GAAATGGCCA TTCAAAGAAT GATCAAAGCA
GGGGCGATTC CGATGACCTC CGCGCAATAT GTGCTCGAAT TGCAGCGCGA CTGGGGCCGC
GCCGATACCT ACGATGCGGT AACCAGGTTG TTCCATGATT TCGGGGGAGC TTACGGGATC
GGGCTGCAAT ATGCCAAAGC GGCTCTCAAA CACTGA
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| Protein sequence | MKTKLTSMLI VTLCAICNAF AQKPAATLLT PTNHTLVMID HQSQMAFAVK NISIEQLRDN
VALVAGGSKI FKVPTVVTTV AEKTFSGPVF PEILSVYPPV SSGYVDRSTM NPWEDAGAHK
AITAKGRKKL VMTGLWTGVC VALPVLSAIQ EGYEVYVITD ASGDLTLEAH EMAIQRMIKA
GAIPMTSAQY VLELQRDWGR ADTYDAVTRL FHDFGGAYGI GLQYAKAALK H
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