| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5452 |
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| Symbol | |
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| ID | 8229063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6577026 |
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| End bp | 6577868 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933295 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003089808 |
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| Protein GI | 255039187 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.662844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.250366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATG TAGCATTACC CATTTTCAAT GCACAGACCC TGGATAATGG TTATGCATTG
AAAACGCCGC ACCTGACCGG CCCCATTCAG CAGGTGATTG AGCTATATTG GATTGGAAAA
GGGAAAGGGA ATATCACGAT CGACTTTTTG AAAACAAATT TTTCCGGAAA TACCCTGTTT
TTCGTTTTGC CGGGCCAGAT CCACCAGATC AACGCGGAAA CTGAATTGAT TGGTAAAAAA
ATTACTTTCT CATTGGATTT GCTTACGGCG GGTGATGGTT TCATTGATGA AGCGGGCAAA
GCCGGTTATT TCACACGTTT ACAGCATGCA GAAGTCGTGA CATTCGACGA AGAAACTGCG
AGAGAAATCA ACGAAATTTT TGAAATTATT TTACTCGAAA TGGCGCGTTG CGAAGACAAT
AAAAACGAAA TGCTGGGCGC ATTACTCGCC CTGTTAATTT CCTACATCCC GCATTCAAAT
GACCAGACCC CGGAAGGTTT GGCATTCAGA AACCCCGACA TCGTTTTCCG GAAGTTTATA
TCTAAAATCG ACGCGCATTT CCGGACGCAA AAGCAGGTGT TTTATTACGC ATCGGAACTG
GCAATCACGC CCAATTACCT GAGCGAAATT TCCAAGAAAG TTTCAGGCTT TTCCGCCCGG
CACCACATTC ATCAGCGTGT GGTGTTGGAG GCAAAGCGGA AGGGTATGAC GACTGATCTG
AATGCAAAAC AAATCGGATT TGAATTGGGA TTCGAAGATC CGTCGACATT CAGCAAGTTC
TTCCGGATCA TGACCGGCGA AAGCTTTTCA GATTTCAGAA AAAAGGAAGT GTGCCTGGGT
TGA
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| Protein sequence | MENVALPIFN AQTLDNGYAL KTPHLTGPIQ QVIELYWIGK GKGNITIDFL KTNFSGNTLF
FVLPGQIHQI NAETELIGKK ITFSLDLLTA GDGFIDEAGK AGYFTRLQHA EVVTFDEETA
REINEIFEII LLEMARCEDN KNEMLGALLA LLISYIPHSN DQTPEGLAFR NPDIVFRKFI
SKIDAHFRTQ KQVFYYASEL AITPNYLSEI SKKVSGFSAR HHIHQRVVLE AKRKGMTTDL
NAKQIGFELG FEDPSTFSKF FRIMTGESFS DFRKKEVCLG
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