| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5431 |
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| Symbol | |
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| ID | 8229042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6554114 |
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| End bp | 6556516 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644933276 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089789 |
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| Protein GI | 255039168 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.109998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCAAA ACTATTTCAA GATCGCCTGG CGTACCTTAC GCAAAAATCG CGCATATGCA
TTCATTAATA TCACCGGCCT TGCCCTCGGA ATGGGTTGCG CCCTGCTGAT TTTTGCACTC
GTCCGCTTCC ATTATCAGAC CGACCGGCAT CACCGGAATT ATGACAGGAT CTATCAGTTC
ACCTCGCAGT TCAAATCGGG TGCGAACGAG TTCAACATCC AGGGCGTTCC GTATGCGCTC
GGCCAGGCGG TACGCAACGA TCATCCGGGC ATAGCGCACG TGGCCATGCT CGATGAATGG
TACGCACCGC TCATATCGGT ACCCGTCCCC AACCAGGCGG ATAAGAAGAT CAAGGACAAA
AGCAGTGAAG GGGCGTTCGT CGAGCCGGCG TATTTTGACA TATTCGACTA CACCTGGATT
GAAGGCGGAC CGAAAGAACT CAGCCAGCCG GGAACTGTGG TGATGAGTGC TGAAATGGCG
AAGAAATGCT TTGGTACGAC CCAAAATGCC GTCGGGCGGG TGGTGAAGCT CGATGCCCGT
GTTCCGGCAC GCGTGGTGGG CGTGTTTGCG GATTACCGCG AGGACACCGA CCTGGCTTAC
TCGATCATGC CTTCGTGGCA AACCATCAGG CAGCAACTCC ATATTCGCCC GGAAAACGAG
CCGTTTTACA ACACCAACGG CAGCACGCAC TGTTTCGCGC TGTTCAGCGA TCGTTTCACC
GTCGCCGACT GGCACAGGCA CGTGCCGGCG TTCGTCAAAA AATACAATCC TCAGAAAGCA
AAAGCAGTGT CCTATCCGGC AGTCGCATTC GGTGAAATGC ACCTTTCTCC CGAGTTTGGA
GGTGTGAGCC CGGCGCTGCT GACGTCGATG ATCTTCATTG GCATCTTGCT GATAGCCACA
GCGAGTATCA ACTTCGTGAA CCTGGCGACG GCGCAGGCGC TTGGCCGTGC GCGCGAGGTG
GGCGTGAGGA AGGTGTTGGG CAGTACCAAA AAGCAGCTTT TCTGGCAGTT TATGGGCGAA
ACTACCCTCA TTGTGGTAGC GGCCCTGGCG GTTGCCATTG GCATATTCCA TTATGGACAG
GAGCTGGCGC ACACCTATCT GCACGGCGCT TTCCGGTTCC GTTTTTACTT TGCACCGTCG
GTGTTGGGCT GGCTGGCGCT CCTGGTGGCG ACGGTTATTT TGCTGGCGGG CTTGTATCCG
GCATTGATTG TGGCGGGCTT CCGTCCGGTG GTAGCGCTGG CGGGGCGGGT TACCACGCGG
CAAAAGGGCG GCTTTTCGCT CAGGCGCGGG CTGGTGGTCA CCCAGTTTGC CATTTCCCAA
ATGCTGATCA TCGGACTGAT AGTCGTGGCG AGGCAGCTAG ATTTTGTACA AACGAAAGAT
CTGGGCTTTC AAAAAGAATC CATTCTGACG ATCGACCTGC CGAACCTGCC TTCCCAGGAC
CGGGCTAAAA TGAACGCGTT CCGAAACCTG GCGACGGCTA TTCCGGATGT GAGCAAGGTG
AGCTATTCGA TGGGCGGGCC GCCGCAATCG GGCTGGACGA GCCAGACGAA CGTCCGCTTC
GATCGCCGGC CGGACGAAGA GCCTTACACG CCGCAGCAGG TGTGGGTAGA TGCCGACTAT
CTGGATTTGT ACGGCCTCAA ACTGGTCGCG GGGCGGAACC TGCAACGCTC AGATACGTTG
CGCGAGGCGG TAATCAACGA AACATTCATG CGCCGGCTCG GTTTCCGCCA GCCGGAGGAG
GTCGTGGGCA AGATTTTGCA TAGATCGGGC ACGCCGCTGG AAATAGTGGG CGTAGTGAAA
GATTATAACC AATCGGATCT TCGCCAGGGT ATTGCGCCCT TGTTTATGAG CACGTTTGCG
GGCGGCTACT ATTCGGCCAA CATCCAGCTG CGGTCGGTCA ATTACAGCCG CGCGGTAAAG
CAATTGGAAA AGGCCTACAA CCAGGTATAT ACCGACAGCT TTTTCGATCC TGAATTTGTG
GATGACCAGA TCCGGCAATC CTACCAGCAG GAGCAGACGA TGGGCCGGCT GATCAATTTC
TTCGCGGGCG TTGCATTGCT GATCGGCTGC ATGGGATTGT ACGGGCTCGT GCTGTTTATG
GTGGCGCAGC GCACCAGGGA GGTGGGCGTT CGGAAGGTGC TGGGCGCGAG CGTGAGCAGC
ATTCTTTTGC TGTTTACCAA TGAGTATATG CAACTGGTCG GCATTGCCTT CCTGTTTGCG
GCCCCGGCGG GCTGGTGGGT GATGAATGGC TGGTTGACGG ATTTTGAATA CAAGATCGCG
CTCAACCCTG TCATATTCAT TTGTGCATTG CTGGCAACGG TGGTGGTAGC CCTGCTCACG
GTGAGTGTGC AGAGCGTGAA AGCGGCGCTG GCAAACCCCG TGAAGTCATT ACGTAGCGAA
TAG
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| Protein sequence | MLQNYFKIAW RTLRKNRAYA FINITGLALG MGCALLIFAL VRFHYQTDRH HRNYDRIYQF
TSQFKSGANE FNIQGVPYAL GQAVRNDHPG IAHVAMLDEW YAPLISVPVP NQADKKIKDK
SSEGAFVEPA YFDIFDYTWI EGGPKELSQP GTVVMSAEMA KKCFGTTQNA VGRVVKLDAR
VPARVVGVFA DYREDTDLAY SIMPSWQTIR QQLHIRPENE PFYNTNGSTH CFALFSDRFT
VADWHRHVPA FVKKYNPQKA KAVSYPAVAF GEMHLSPEFG GVSPALLTSM IFIGILLIAT
ASINFVNLAT AQALGRAREV GVRKVLGSTK KQLFWQFMGE TTLIVVAALA VAIGIFHYGQ
ELAHTYLHGA FRFRFYFAPS VLGWLALLVA TVILLAGLYP ALIVAGFRPV VALAGRVTTR
QKGGFSLRRG LVVTQFAISQ MLIIGLIVVA RQLDFVQTKD LGFQKESILT IDLPNLPSQD
RAKMNAFRNL ATAIPDVSKV SYSMGGPPQS GWTSQTNVRF DRRPDEEPYT PQQVWVDADY
LDLYGLKLVA GRNLQRSDTL REAVINETFM RRLGFRQPEE VVGKILHRSG TPLEIVGVVK
DYNQSDLRQG IAPLFMSTFA GGYYSANIQL RSVNYSRAVK QLEKAYNQVY TDSFFDPEFV
DDQIRQSYQQ EQTMGRLINF FAGVALLIGC MGLYGLVLFM VAQRTREVGV RKVLGASVSS
ILLLFTNEYM QLVGIAFLFA APAGWWVMNG WLTDFEYKIA LNPVIFICAL LATVVVALLT
VSVQSVKAAL ANPVKSLRSE
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