Gene Dfer_5425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5425 
Symbol 
ID8229036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6549538 
End bp6550104 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content48% 
IMG OID644933270 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003089783 
Protein GI255039162 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0840105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.042227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT TAGTTTTATT TGCACATATC TCGCTGGATG GTTTCGCGGG AGATACTCAG 
GGTGGCCTCG GTTTCTTATC CTACAATGAA GAACTTCAAC AGTTCGCGGA AGAGCTCGTA
TCCACCGTGG GCGCGCCAGT GTACGGCAGA AACACCTATC ATTTGATGGA AGGCTATTGG
CCCACCGTAC TGAATAATCC GGAAGCAAAT GAACATGCCC TGAAACATGC GAGATGGGTG
CACGAAATTC CCAAATTCGT TTTCTCAACC ACATTGCCCA GCGCCGACTG GAATAACACA
ACGCTCATCA AAGACAACGT AGCCGAAGAG ATAAGTAAAC TCAAACAGCA GCCAGGCAAA
GACCTCGTGA TCTTTGGCAG CCCCGGCCTT GCTAAAAGTC TGATGAACCT CGGCCTGATC
GACGAATATA AACTGACGCT TCATCCGATT ATTTTAGGAA AAGGCATCAG TCTCTTCGAT
AGTAATACCG AAATGAGCAA ACTGAAATTG GTTGAATCGA AAACGCTGGG ATCGGGCGTG
GTGACGCTGC ACTATACGGC CCGGTAG
 
Protein sequence
MRKLVLFAHI SLDGFAGDTQ GGLGFLSYNE ELQQFAEELV STVGAPVYGR NTYHLMEGYW 
PTVLNNPEAN EHALKHARWV HEIPKFVFST TLPSADWNNT TLIKDNVAEE ISKLKQQPGK
DLVIFGSPGL AKSLMNLGLI DEYKLTLHPI ILGKGISLFD SNTEMSKLKL VESKTLGSGV
VTLHYTAR