Gene Dfer_5418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5418 
Symbol 
ID8229029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6540575 
End bp6541069 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content54% 
IMG OID644933263 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003089776 
Protein GI255039155 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.192124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0663146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTT ATTCAGAACG TCTGCGCTAC GAAAAATTCA CTCCCAATCA TTTCGAAGAC 
TATTTCCGGC TCGTTTCAAG GCAGGATGTG ATGGTACACA TCAGCGGCGC GGGGCTCGAT
CTGCCAGGCG CCCGCAAAAG ATTCGAAAGG TCGCTCCGCG CCGATGGGCG GCAAAATGAC
ATGGGCTTTG TTGCCGTTTA TGAACGCGCC ACCGATTTGT ACGTCGGTTT GGGCAAAATC
GTGCCTTTTG AAGACGGCTT CACGGAAATA GGCTACGCAT TGCTCCCCGA ATTCTGGGGC
AAGGGCTACG CCTCGGAAAT CACCGCCACC CTCATCGCCT ACGCCCGCAA TTGCGGTAGC
GTGGAATCGC TCGTCGCCCT GGTGTCTCCC GAAAACCAGG CTTCGATTAA CGTTCTTACC
AAGCAGCAAT TCCGCTTTTT CAGGGAAGTA CCGGAAGGAG ACGTGGTGCG GCATGATTAC
ATTCTGGACT TGTAG
 
Protein sequence
MQFYSERLRY EKFTPNHFED YFRLVSRQDV MVHISGAGLD LPGARKRFER SLRADGRQND 
MGFVAVYERA TDLYVGLGKI VPFEDGFTEI GYALLPEFWG KGYASEITAT LIAYARNCGS
VESLVALVSP ENQASINVLT KQQFRFFREV PEGDVVRHDY ILDL