Gene Dfer_5417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5417 
Symbol 
ID8229028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6539805 
End bp6540572 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content54% 
IMG OID644933262 
Producthypothetical protein 
Protein accessionYP_003089775 
Protein GI255039154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.423817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0412586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATC AATTACTTTT TCTTCTCTTT GTTGGGTTAA CACCTTTTTA CTCCTGCACC 
GATCCCAACA AGGAACCCGG GCCGGACGGG AACACGAGCG GCAAAGCAGG TTATCTCGTA
GGCAAGGTGC TCGACCAGCG CGGAAATGGC GTTGCCGGAG CCACCGTTTT TACTGAAAAT
ACAGTTTTCA AAGGCCACGG CGCGGAGGTG GCTTCTAAAA ACGATGGCAC TTACCAGATG
GCGCTTGTGG AAGGTCTGGG CCAATGGATT GCGGACGCCT ACACACTCGT AGAATACAAT
GGGAAGGTCT ACAAACTGCG CCTGCACCCC GAAAATACCG AATCGTTTGC AGTGGAAGAA
AAGCCGGTGC GCAACTTCGA ATGGCGCATT CAGGGCCGCC TGCCCGACAA AAGCCTGAAC
CTTTATTATG GAGGTTCCGC CGAGCTTTAT CCCGACCCTA ACACTGAAAT TCGCTCCGAG
GACGTGGAAT TCAGCTTCAC CCCCGAAGGC AAGCTGATCG ACGGCTCCAC CGGAAAAACC
CTGAAATTGA GCGGAGGAAA GAGCGGTTCC AATAACCATA ACCGGATCGA CGACATTCCC
ATTGGCCGCT ACCGGGTAAC GGCACTGCAC AAGCCGACCG GCCTGCGCCT GCGGGTGGGT
GATGCATGGG ATGGCGATGA TTATTTTGAC AGCGTCACGA TGGAGTTCAA AGGCACGGAA
GCGTCTTACC GGGCTAACCA AATGGGCATT GCATTTACCG ACCGGTAA
 
Protein sequence
MKHQLLFLLF VGLTPFYSCT DPNKEPGPDG NTSGKAGYLV GKVLDQRGNG VAGATVFTEN 
TVFKGHGAEV ASKNDGTYQM ALVEGLGQWI ADAYTLVEYN GKVYKLRLHP ENTESFAVEE
KPVRNFEWRI QGRLPDKSLN LYYGGSAELY PDPNTEIRSE DVEFSFTPEG KLIDGSTGKT
LKLSGGKSGS NNHNRIDDIP IGRYRVTALH KPTGLRLRVG DAWDGDDYFD SVTMEFKGTE
ASYRANQMGI AFTDR