| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5416 |
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| Symbol | |
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| ID | 8229027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6538328 |
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| End bp | 6539743 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644933261 |
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| Product | Protoporphyrinogen oxidase-like protein |
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| Protein accession | YP_003089774 |
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| Protein GI | 255039153 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0286038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG ACAAAAGAAT TGTCATCGTG GGCGGTGGTC CTGCGGGATG CGCTGCTGCC
TCGTATGCCT TAAAAAAGGG TTTTCAAAAT GTGACATTGC TGGAAGCTGC CGCTTCATTG
GGTGGGCTTC ATCGAGATGT AGAAATCGAT GGATTGCATT TTGATCTAGG TGCATTCTTT
TTTTGGAACC ATCATCAGGT TTTTTCGCTC TTTCCAGGTC TGCGGGAAAA AATGATACAC
GCCGGTAGTT CCGGACATTT ATCATTAAGT AATGATTTTA ATTTTGACAG ATATCCCATA
ACGCTAAGGG GATATGTGAA AGAACATGGG CTGGTGGCAA CGATTTGTGA CTTGTTTAAA
ATCGCGCAAT ACCGCGCATT CCGTTCCGAA ATGGCATGCA ACAACGTGGA GGAGCTGCTC
TTGTATTTTA TGGGGCCTTT TTATAGAAAA ACGGGGTTGG ATAACTACAT ACAACGATTA
TTTCATTTAC ATCCAAAGGA AATTCATATC GAGTTTGCAC GGAAGCGGGT TAGTGGTGTC
ATCGACAAGT TCAGGAGTAA GAATGTCATT AAAAACATGC TGAAAGGCAA TTTGGCCTAT
TTCGCGAGGT ATTCTGCACC ACAAGATGTT TGGGCTAGGC CTGAATCCGG CTTCGCTGCT
ATGTACGAAT ATATTGCGGA AGCGATCAGA GAGGCGGGGG GCAATGTGCT ATGCAATCAC
CGGGTTGAAA GGATCAATTA CCGGGAAAAA TACATAACAA TGAGTGATGG GTCAATTGTG
GAGTATGATT ACCTTTTATC GAGCCAGCCT TTGCAGTTGA CAAGCAAGAT GACGGGAATA
AAATTGGATG CCCTATTAAA TTACCAGCCT TTATGCAGCC TGTTTTATGA GTCAGAGGAA
GCGATCCTGC CGGGGTGTTT TGTGCTTTTT AATTTTTCCA GAAAAGGGAA ATGGAAAAGG
GTTACGTTTC ATTCCAATTA TTATAATATT GAGAAAGGTG ACGATGCACC ACGCCGGCAT
TATTTTGTTG TAGAGTCGAT GCCATCTAAG GATGAAGTAG TCAATCCGCT TCTTGCAAAG
GAATTGGATT CTGATTTCAG GGGAACTTTC GAAAAGACAA AACTGCAAGA CGCTTTCAAG
AATATTTCAT TAAAAGGGCA CCGTATTACT GAAAATGGCT ATCCTGTTTT TGGAAAATCA
TTTGACAGAA GAAAGGTTGA TGCTTTTCAC GAAGAGCTGT TGAACTTGGA TATCCATAAT
ATCGGACGCC AGGGTGAATT CGATCATGTA AGTTCAAGTG ATGCATCCAA GAGCGCTATG
AATGCAATCG AGGGCATCTG GAAGAAAGAG GAATTTGCAA TTCATTTCCT CATTTTGACA
ATTAACCACG CCCAAAACCC AGCGCATACC ATATAA
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| Protein sequence | MKIDKRIVIV GGGPAGCAAA SYALKKGFQN VTLLEAAASL GGLHRDVEID GLHFDLGAFF
FWNHHQVFSL FPGLREKMIH AGSSGHLSLS NDFNFDRYPI TLRGYVKEHG LVATICDLFK
IAQYRAFRSE MACNNVEELL LYFMGPFYRK TGLDNYIQRL FHLHPKEIHI EFARKRVSGV
IDKFRSKNVI KNMLKGNLAY FARYSAPQDV WARPESGFAA MYEYIAEAIR EAGGNVLCNH
RVERINYREK YITMSDGSIV EYDYLLSSQP LQLTSKMTGI KLDALLNYQP LCSLFYESEE
AILPGCFVLF NFSRKGKWKR VTFHSNYYNI EKGDDAPRRH YFVVESMPSK DEVVNPLLAK
ELDSDFRGTF EKTKLQDAFK NISLKGHRIT ENGYPVFGKS FDRRKVDAFH EELLNLDIHN
IGRQGEFDHV SSSDASKSAM NAIEGIWKKE EFAIHFLILT INHAQNPAHT I
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