Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5404 |
Symbol | |
ID | 8229015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6524522 |
End bp | 6525610 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644933249 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003089762 |
Protein GI | 255039141 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.597323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCTT ATCTTTTCGG GCAAAAATGG CTGCTGGGTT TCGCCCTTGC ACTGGTTTAC ATTCCGCTCC GAACATATAT CAATGTACCT CAGCAGAATT GGAACACGAT ACCACGGAAC CTGCCGCTTT TCGGGCTTGA AATCGTGATC AGTACCGTTT TCTATACCGC CTGGATTTAC CTGATGGACT GGTTTTTAAG AAAGCAGGCC TCCCTAAGCG GTGCCGATAA ATCACCCGCG TTCAGCATCC GCGACCAGCT CATCACCCTC ATTCCGGCGG TGCTGCTGGC ATTCCTTTTC AATATGATGC TGGCCCGGAC GTGGGGCCTC ATGAGCCAAT GGTGGAACCC GCTGCCCAGG CCGGTAATGA GCGATCCGCG CGTGCGCGAC CTCATGTACA CGCGCTGGCG GGCAGGCCAG GCGCTCACGA TCCTCGCGCT CATTGCGGCC TATTACCTTT GCGTGAGCAT TCAGGTGCAG GAAAAAATGA AAAAGCTCCT CGTAAGCTCG GAAAGGCTGG AAAAGGAGAA TATGCACGCG CGTTTTCTGG CATTGAAAAA CCAGGTGAGC CCCCATTTTT TGTTCAATAA CCTCAGCGTG CTGTCGTCGC TGGTGGAATC GAGGCCGGAG CAGTCGGGGG AGTTTATACA GGAATTGTCC TCGGCGTACC GCTACATTCT CGAACAATCG GAGCTGGATA AGATCAGTTT AAAGGAGGAA ATGCGGTTTC TGGACACTTA TATGTACCTG CTGCGGACGC GTTTCAAGGA AAAAGTGGTG CTCGACTCCC GGCTCACCCC GGCGGAACAG GAGCGGTATG CGATTATTCC GCTTACTTTG CAGCTGTTGG TCGAAAATGC CGTGAAACAT AACACCATGT CGGTAGTTAA TCCTTTGATT ATCAGTATTT CAATTATGGA TCAAATGCTT GTCGTGAGCA ATCCGCTGCA GCTCCGGCAG CAGGACCAGC CTACGACGCG CCTCGGATTG AAGAATATTA TCAGCCGGTA TAAACTGTTG CAGGACAAGG ATGTGGTGAT CGAACAAACT GCCATGCATT TTACCGTTAA AATCCCCCTG ATGTCATGA
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Protein sequence | MRPYLFGQKW LLGFALALVY IPLRTYINVP QQNWNTIPRN LPLFGLEIVI STVFYTAWIY LMDWFLRKQA SLSGADKSPA FSIRDQLITL IPAVLLAFLF NMMLARTWGL MSQWWNPLPR PVMSDPRVRD LMYTRWRAGQ ALTILALIAA YYLCVSIQVQ EKMKKLLVSS ERLEKENMHA RFLALKNQVS PHFLFNNLSV LSSLVESRPE QSGEFIQELS SAYRYILEQS ELDKISLKEE MRFLDTYMYL LRTRFKEKVV LDSRLTPAEQ ERYAIIPLTL QLLVENAVKH NTMSVVNPLI ISISIMDQML VVSNPLQLRQ QDQPTTRLGL KNIISRYKLL QDKDVVIEQT AMHFTVKIPL MS
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